Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq25 147 2e-30 seq1 138 8e-28 >seq25 Length=839721 Score = 147 bits (162), Expect = 2e-30 Identities = 161/214 (75%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184 ||| ||||||||||||||||||||||| ||||| ||||| |||| || || |||| Sbjct 326580 CAAGACCAGGTGAAGCGTGCTCTCCTTCTGGATATTGTAGTCGGAAAGCGTACGACCGTC 326639 Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244 ||||||||||| ||||||||||||| |||||||| || | ||| | || ||||| || Sbjct 326640 CTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTATC 326699 Query 44245 CGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 | |||||| ||| | | | |||||||| | || || ||||| | || ||||| Sbjct 326700 CTGAATCTTCGCCTTGACGTTGTCGATGGTGTCCGACGACTCAACCTCGAGGGTGATCGT 326759 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||| || || | ||||| ||||| || |||||| Sbjct 326760 CTTACCAGTCAACGTCTTAACGAAAATCTGCATG 326793 Score = 138 bits (152), Expect = 8e-28 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 44132 AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGC 44191 ||||| || ||||| ||||| || ||||||||||| | ||| ||| | || |||| Sbjct 326871 AGGTGGAGAGTGCTTTCCTTCTGAATGTTGTAATCAGAGAGCGTGCGACCATCCTCCAAT 326930 Query 44192 TGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATC 44251 ||||| || |||||||| | |||||| || || | ||| | || ||||| ||| ||| Sbjct 326931 TGCTTGCCAGCAAAGATGAGACGCTGTTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATC 326990 Query 44252 TTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCC 44311 ||| ||||| | | |||||||| | || || ||||| | ||||||||||| ||| Sbjct 326991 TTCGCCTTCACGTTATCGATGGTGTCCGACGACTCAACCTCAAGAGTAATCGTCTTGCCC 327050 Query 44312 GTGAGGGTCTTCACGAAGATTTGCAT 44337 || |||||||| |||||||| ||||| Sbjct 327051 GTCAGGGTCTTGACGAAGATCTGCAT 327076 Score = 123 bits (136), Expect = 2e-23 Identities = 154/209 (74%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 44132 AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGC 44191 || || | |||||||||||| ||||| ||||| || | || ||| | || || ||| Sbjct 327432 AGATGCAACGTGCTCTCCTTCTGGATATTGTAGTCAGAAAGAGTGCGGCCATCCTCGAGC 327491 Query 44192 TGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATC 44251 ||||| || || ||||| | |||||||| || | ||| | |||||||| ||| ||| Sbjct 327492 TGCTTGCCCGCGAAGATTAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTATCCTGAATC 327551 Query 44252 TTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTC 44309 ||| ||| || ||| | |||||||||| ||| |||||||| | || || ||||| | Sbjct 327552 TTCGCCTTGACATTGT--CGATGGTGTCGGAGGACTCCACCTCAAGGGTGATAGTCTTCC 327609 Query 44310 CCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||| | ||||| || ||||| |||||| Sbjct 327610 CCGTCAACGTCTTGACAAAGATCTGCATG 327638 Score = 111 bits (122), Expect = 1e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 44132 AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGC 44191 || || || || |||||||| || |||||||| || | || || |||| |||| | Sbjct 327154 AGATGGAGGGTACTCTCCTTCTGAATGTTGTAGTCAGAAAGAGTACGACCGTCCTCCAAC 327213 Query 44192 TGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATC 44251 ||||| || || || |||| ||||||||||| | || | ||| ||||| ||| ||| Sbjct 327214 TGCTTTCCAGCGAAAATCAGGCGCTGCTGATCAGGGGGGATACCCTCCTTGTCCTGAATC 327273 Query 44252 TTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCC 44311 ||| ||||| | | |||||||||| ||| || ||||| | || || ||||| || Sbjct 327274 TTCGCCTTCACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCTTCCCG 327333 Query 44312 GTGAGGGTCTTCACGAAGATTTGCAT 44337 || | ||||| || ||||| ||||| Sbjct 327334 GTCAACGTCTTGACAAAGATCTGCAT 327359 >seq1 Length=3640883 Score = 138 bits (152), Expect = 8e-28 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || ||||| || |||||| || |||||||| |||| ||| ||| |||| || Sbjct 1684293 ACGAGATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCG 1684234 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 ||||||||||| |||||||| | |||||||| || | ||| | ||| ||||| ||| Sbjct 1684233 AGCTGCTTCCCAGCAAAGATGAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTATCCTGA 1684174 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | | || ||||||| || || || || | |||||||||||| Sbjct 1684173 ATCTTTGCCTTCACGTTGTCGATTGTGTCGGATGACTCGACTTCAAGCGTAATCGTCTTC 1684114 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| |||||||| || ||||| ||||| Sbjct 1684113 CCCGTAAGGGTCTTGACAAAGATCTGCAT 1684085 Score = 134 bits (148), Expect = 1e-26 Identities = 157/211 (74%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 44128 CACCA-GGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGT 44186 ||||| ||||||| || ||||| || || ||||| ||||||| ||| ||| |||| | Sbjct 1685313 CACCAAGGTGAAGGGTACTCTCTTTCTGAATGTTATAATCGGAGAGCGTACGCCCGTCCT 1685254 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 ||| |||||| || || ||||| | |||||||||||| | ||| | |||||||| ||| Sbjct 1685253 CCAACTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGAGGAATGCCTTCCTTGTCCT 1685194 Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||||| | | || || || | || || ||||||| || || |||| Sbjct 1685193 GGATCTTTGCCTTCACGTTGTCAATTGTATCCGACGACTCGACCTCCAAGGTGATAGTCT 1685134 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||||| || |||||||| ||||| ||||| Sbjct 1685133 TCCCCGTCAGCGTCTTCACAAAGATCTGCAT 1685103 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| || | ||| | | || || ||||| || |||||| || || || ||||| Sbjct 1685105 CATTCCACCACGCAGACGAAGAACGAGATGAAGAGTAGACTCCTTCTGAATATTATAATC 1685046 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || || |||| || ||||| || ||||| ||||||| ||||| ||||| | Sbjct 1685045 AGAAAGAGTACGACCGTCCTCGAGCTGTTTGCCGGCGAAGATCAGGCGCTGTTGATCAGG 1684986 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 ||| | || ||||| ||| |||||| ||| | | | |||||||||| || || Sbjct 1684985 AGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGAAGACTC 1684926 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| | || ||||| || || || | ||||||||| ||||||||||| Sbjct 1684925 GACCTCGAGAGTGATCGTTTTCCCTGTCAAGGTCTTCACAAAGATTTGCAT 1684875 Score = 109 bits (120), Expect = 4e-19 Identities = 150/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 44132 AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGC 44191 || ||||| || |||||| || ||||||||||| | | || | || |||| | Sbjct 1684518 AGATGAAGTGTCGACTCCTTCTGAATGTTGTAATCCGACAACGTCCGACCATCTTCCAAC 1684459 Query 44192 TGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATC 44251 |||||||| || ||||| | ||| |||||||| | || | || ||||| || ||| Sbjct 1684458 TGCTTCCCAGCGAAGATGAGACGTTGCTGATCAGGGGGAATGCCCTCCTTATCTTGGATC 1684399 Query 44252 TTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCC 44310 || |||| | ||| | || ||||| | ||| |||||||||| ||| ||||||||||| Sbjct 1684398 TTG-GCTTTGACGTTATCAATTGTGTCAGAGGACTCCACCTCCAGCGTGATCGTCTTTCC 1684340 Query 44311 CGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| | ||||| ||||| || ||||| Sbjct 1684339 CGTCAAAGTCTTGACGAAAATCTGCAT 1684313 Score = 102 bits (112), Expect = 6e-17 Identities = 150/211 (71%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 44128 CACCAGG-TGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGT 44186 ||||| | ||||| || |||||| |||||||||||||| | ||| || | || | Sbjct 1684804 CACCAAGATGAAGAGTAGACTCCTTCTGGATGTTGTAATCAGAAAGTGTACGACCATCCT 1684745 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 | || ||||| || || || |||| |||||||| || | ||| | ||| ||||| ||| Sbjct 1684744 CGAGTTGCTTTCCAGCGAAAATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCT 1684685 Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||||| | | || ||||| | ||||| ||||| | || || |||| Sbjct 1684684 GGATCTTTGCCTTCACGTTGTCGATTGTGTCAGAAGATTCGACCTCAAGAGTGATAGTCT 1684625 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || | |||||||| || |||||||| Sbjct 1684624 TGCCAGTCAAAGTCTTCACAAAAATTTGCAT 1684594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989842802359