Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq1 161 2e-34 seq25 138 3e-27 >seq1 Length=3640883 Score = 161 bits (178), Expect = 2e-34 Identities = 160/207 (77%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || ||||| || | ||||| ||||||||||| |||||||| || || ||| Sbjct 1684878 CAAATCTTTGTGAAGACCTTGACAGGGAAAACGATCACTCTCGAGGTCGAGTCTTCCGAC 1684937 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| |||||||| || || |||||||| || || || Sbjct 1684938 ACCATCGACAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCTCCTGATCAACAG 1684997 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| ||||||||||| || || | |||||| | |||||||| | Sbjct 1684998 CGCCTGATCTTCGCCGGCAAACAGCTCGAGGACGGTCGTACTCTTTCTGATTATAATATT 1685057 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || || || || || ||||| ||| Sbjct 1685058 CAGAAGGAGTCTACTCTTCATCTCGTT 1685084 Score = 118 bits (130), Expect = 3e-21 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| || || || || || || |||||| | ||||| || || || Sbjct 1685106 CAGATCTTTGTGAAGACGCTGACGGGGAAGACTATCACCTTGGAGGTCGAGTCGTCGGAT 1685165 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||| || |||||| |||||||| ||||| || |||||||| ||||| Sbjct 1685166 ACAATTGACAACGTGAAGGCAAAGATCCAGGACAAGGAAGGCATTCCTCCGGATCAGCAG 1685225 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| ||||| ||| | || || || | || || ||||||||||| | Sbjct 1685226 CGTCTCATCTTCGCTGGAAAGCAGTTGGAGGACGGGCGTACGCTCTCCGATTATAACATT 1685285 Query 178104 CAAAAAGA 178111 || ||||| Sbjct 1685286 CAGAAAGA 1685293 Score = 116 bits (128), Expect = 9e-21 Identities = 150/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || || || || || ||||| || || || || || || ||| Sbjct 1684088 CAGATCTTTGTCAAGACCCTTACGGGGAAGACGATTACGCTTGAAGTCGAGTCATCCGAC 1684147 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || |||||||||||| || || || |||||||| |||||||| Sbjct 1684148 ACAATCGACAACGTGAAGGCAAAGATTCAGGATAAGGAGGGTATCCCTCCCGACCAGCAG 1684207 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || |||||||| || || | || || |||| || ||| | Sbjct 1684208 CGCCTCATCTTTGCTGGGAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATT 1684267 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || || || || || ||||| ||| Sbjct 1684268 CAGAAGGAGTCTACCCTTCATCTCGTT 1684294 >seq25 Length=839721 Score = 138 bits (152), Expect = 3e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || | || || || ||||||||||||||||| || || ||| Sbjct 326789 CAGATTTTCGTTAAGACGTTGACTGGTAAGACGATCACCCTCGAGGTTGAGTCGTCGGAC 326730 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||||||||| || || || || |||||||||||||| Sbjct 326729 ACCATCGACAACGTCAAGGCGAAGATTCAGGATAAGGAGGGCATTCCTCCGGACCAGCAG 326670 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| ||||| || ||||| || || || | || ||| |||| || || || Sbjct 326669 CGCCTGATCTTTGCCGGCAAGCAGCTGGAGGACGGTCGTACGCTTTCCGACTACAATATC 326610 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 || || || || || || || || ||| | ||| Sbjct 326609 CAGAAGGAGAGCACGCTTCACCTGGTCTTGCGTCTC 326574 Score = 136 bits (150), Expect = 1e-26 Identities = 153/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || | || || || || |||||||| |||||||| ||| ||| Sbjct 327634 CAGATCTTTGTCAAGACGTTGACGGGGAAGACTATCACCCTTGAGGTGGAGTCCTCCGAC 327575 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||||||||| || ||||| || ||||| |||||||| Sbjct 327574 ACCATCGACAATGTCAAGGCGAAGATTCAGGATAAGGAAGGCATTCCTCCCGACCAGCAG 327515 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || |||||||| ||||| | |||||| | || || || || Sbjct 327514 CGCCTAATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACTCTTTCTGACTACAATATC 327455 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || ||||||||| Sbjct 327454 CAGAAGGAGAGCACGTTGCATCTTG 327430 Score = 109 bits (120), Expect = 1e-18 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || || || ||||| || || ||||| || || ||| Sbjct 327073 CAGATCTTCGTCAAGACCCTGACGGGCAAGACGATTACTCTTGAGGTTGAGTCGTCGGAC 327014 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || |||||||||||||| || || |||||||| ||||| || Sbjct 327013 ACCATCGATAACGTGAAGGCGAAGATTCAGGACAAGGAGGGCATCCCTCCTGACCAACAG 326954 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || || | || ||||| | || || | ||||| ||| | Sbjct 326953 CGTCTCATCTTTGCTGGCAAGCAATTGGAGGATGGTCGCACGCTCTCTGATTACAACATT 326894 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || ||| || || || |||| Sbjct 326893 CAGAAGGAAAGCACTCTCCACCTTG 326869 Score = 105 bits (116), Expect = 2e-17 Identities = 136/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || | || || || || ||||| |||||||| || ||| ||| Sbjct 327356 CAGATCTTTGTCAAGACGTTGACCGGGAAGACCATCACTCTCGAGGTCGAGTCCTCCGAC 327297 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || |||||||||||||| || || ||||| || || ||||| Sbjct 327296 ACCATCGACAATGTGAAGGCGAAGATTCAGGACAAGGAGGGTATCCCCCCTGATCAGCAG 327237 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || ||||| ||||| ||| | || || || | |||||| | || || ||| | Sbjct 327236 CGCCTGATTTTCGCTGGAAAGCAGTTGGAGGACGGTCGTACTCTTTCTGACTACAACATT 327177 Query 178104 CAAAAAGA 178111 || || || Sbjct 327176 CAGAAGGA 327169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203729241303638