Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457895.1_202015-11- 03] 14 sequences; 27,696,343 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq6 105 8e-18 >seq6 Length=2137015 Score = 105 bits (116), Expect = 8e-18 Identities = 183/263 (70%), Gaps = 5/263 (2%) Strand=Plus/Plus Query 145963 GGGTTCCTC-TTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTA 146021 ||||||||| ||||||| || || | || | ||| || |||||||||| | |||||| Sbjct 2112744 GGGTTCCTCCTTGATCTTCCGAATGACCTCTCGGAGTTGATCCACGCCCT--CTCCGGTA 2112801 Query 146022 A--TCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACG 146079 || | | | | ||||| ||| || || || ||||||||||| |||||||| || Sbjct 2112802 TAGTCCTTTTCGCAATCCACATACTTCGCACCAAAATGCCTCCACTGAAACCCGTACACA 2112861 Query 146080 GGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGAC 146139 || ||||| || || | ||||| || ||||| | | | || ||| ||| Sbjct 2112862 GGACCCAGATCTCCTTCCCGTCTGTGACCGAGCCCTCGCTTCTCTAAAAATTCCTTTGAC 2112921 Query 146140 CCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCC 146199 || || ||||||| || || ||| || || ||||| | ||||||||||||| || Sbjct 2112922 CCATTCCCGTCCCAAATTTTCACGGCCTTCTTTGAGAGAATAGTGGAGTCCGTGGAGCCT 2112981 Query 146200 CTGATGAACCAGAGCAGCTCTTC 146222 | | |||||||| |||||||| Sbjct 2112982 TTCACAAACCAGAGAAGCTCTTC 2113004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076696736560