Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457895.1_202015-11- 03] 14 sequences; 27,696,343 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq5 87.8 4e-12 >seq5 Length=2295515 Score = 87.8 bits (96), Expect = 4e-12 Identities = 167/246 (68%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 248826 CTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGA 248885 ||||| |||||| ||| ||||| || || || || || ||||| ||| || Sbjct 536534 CTTTGGTTTCAAGACGTTGGAGCGCTCTTACCTTCTTCGGATCAATGGCCGTGTCGCAGA 536593 Query 248886 ACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAG 248945 ||| ||||||||| | ||||| || |||||||| |||||| | ||| | || | Sbjct 536594 ACGTCCACAGCACATGATCATGCGCGTAGCTGTCGGCATTCACGGCGCTGATGTCGATCG 536653 Query 248946 CGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACGCT 249005 || | || || |||| | ||| ||||| | | || || ||| |||| || || Sbjct 536654 CGCTATTGAAACCTACAACCTGATGTCCGAACGTTACTTCACTCACGCCTCACCAACACT 536713 Query 249006 CTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGA 249065 ||||||||| ||||| ||| ||| |||||||||| || || || |||| |||| Sbjct 536714 CTTCAACGCGGGTACACCCAATCCTCAATTGAGCTCGTGTTTCCTGGTTTGCATGAAAGA 536773 Query 249066 CGACTC 249071 ||||| Sbjct 536774 TGACTC 536779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073766207393152