Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457895.1_202015-11-
03] 14 sequences; 27,696,343 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq6 93.3 4e-14
>seq6
Length=2137015
Score = 93.3 bits (102), Expect = 4e-14
Identities = 132/183 (72%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 21282 TACTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGG 21341
|||| ||| |||||||| |||||||| ||||||||||| || |||||||| || || ||
Sbjct 2112823 TACTTCGCACCAAAATGCCTCCACTGAAACCCGTACACAGGACCCAGATCTCCTTCCCGT 2112882
Query 21342 CGGTCCCCGAAGCCCT-GCGCCGCCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTT 21400
| || ||| |||||| || | | ||||| | ||||| | | |||||||||||||
Sbjct 2112883 CTGTGACCG-AGCCCTCGCTTCTCTAAAAATTCCTTTGACCCATTCCCGTCCCAAATTTT 2112941
Query 21401 TACGCCGCGGCGCGACAGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAGCAACTC 21460
||| | || || |||||||| |||||||| | | |||||| || | |||
Sbjct 2112942 CACGGCCTTCTTTGAGAGAATAGTGGAGTCCGTGGAGCCTTTCACAAACCAGAGAAGCTC 2113001
Query 21461 CTC 21463
||
Sbjct 2113002 TTC 2113004
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427775927010720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |