Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457895.1_202015-11- 03] 14 sequences; 27,696,343 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq1 91.5 1e-13 >seq1 Length=3403828 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 43930 CTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAA 43989 |||||| |||||||| |||||| | ||| |||| ||||| || ||||| || || Sbjct 2304618 CTCTTTCTGAATATTGTAATCGGAGAGAGTTCGCCCATCCTCCAACTGCTTTCCAGCGAA 2304559 Query 43990 TATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCAT 44049 ||||||||||||||||| |||| | ||||| || || ||| || || || | Sbjct 2304558 GATCAACCGTTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAATCTTCGCCTTCACGTT 2304499 Query 44050 AGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCAC 44109 ||| ||| || | | ||| || |||| || || || || || || |||||||| || Sbjct 2304498 GTCAATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTCTTCCCCGTCAAAGTCTTTAC 2304439 Query 44110 AAATATTTGCATG 44122 || || |||||| Sbjct 2304438 GAAAATCTGCATG 2304426 Score = 82.4 bits (90), Expect = 5e-11 Identities = 143/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 43914 CCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCA 43973 ||| ||| || ||||||||||| ||||| || ||||| | | || | || |||| Sbjct 2305147 CCAGATGGAGGGTGCTCTCTTTCTGAATGTTGTAATCCGAAAGTGTGCGACCGTCCTCCA 2305088 Query 43974 ATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAA 44033 |||| || || ||||| |||| |||||||||||| | || | ||||| || ||| || Sbjct 2305087 ATTGCTTGCCCGCAAAAATCAGGCGTTGCTGGTCCGGCGGGATGCCTTCCTTGTCTTGAA 2305028 Query 44034 TTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTAC 44093 | || || || || | | || || | | ||| || || | ||| ||||| || | Sbjct 2305027 TCTTCGCCTTCACATTATCGATCGTGTCCGAAGACTCTACCTCCAACGTGATTGTCTTGC 2304968 Query 44094 CGGTTAAAGTCTTCACAAATATTTGCAT 44121 | || | ||||| || || || ||||| Sbjct 2304967 CTGTGAGGGTCTTGACGAAGATCTGCAT 2304940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354777539466072