Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457895.1_202015-11-
03] 14 sequences; 27,696,343 total letters
Query= NC_005906.1
Length=81755
Score E
Sequences producing significant alignments: (Bits) Value
seq8 91.5 8e-14
>seq8
Length=1864753
Score = 91.5 bits (100), Expect = 8e-14
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 11453 AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACC 11512
|||||||| | | |||||||||| |||||||||||||||||||||||||||| |||
Sbjct 428289 AATTGGCCAACGTGGGGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACC 428230
Query 11513 AACTGAGCTAATGGGCC 11529
|||||||||| | ||||
Sbjct 428229 AACTGAGCTAGTCGGCC 428213
Score = 87.8 bits (96), Expect = 9e-13
Identities = 56/62 (90%), Gaps = 0/62 (0%)
Strand=Plus/Minus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| |||||||||||||||||||||||||||| ||||||||||||| | ||
Sbjct 398587 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAGTCGG 398528
Query 11528 CC 11529
||
Sbjct 398527 CC 398526
Score = 84.2 bits (92), Expect = 1e-11
Identities = 56/63 (89%), Gaps = 0/63 (0%)
Strand=Plus/Minus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| |||||||||||||||||||||||||||| |||| |||||||| | ||
Sbjct 373289 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAGTCGG 373230
Query 11528 CCG 11530
|||
Sbjct 373229 CCG 373227
Lambda K H
0.640 0.410 0.922
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 261491155383064
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |