Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457895.1_202015-11-
03] 14 sequences; 27,696,343 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq8 120 5e-23
seq1 95.1 2e-15
>seq8
Length=1864753
Score = 120 bits (132), Expect = 5e-23
Identities = 120/153 (78%), Gaps = 2/153 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||||||||||| |||| ||| |||||| || |||||||| || ||||| ||||| |||||
Sbjct 1672838 GCTAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGCATCACGAAGCCTGCTAT 1672780
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| || || || |||||||| || || || ||| |||| || | |||| || ||||
Sbjct 1672779 CCGCCGCCTCGCACGTCGTGGCGGTGTGAAACGTATCTCGGGCCTCATCTACGAGGAGAC 1672720
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGT 16584
|||| |||| | |||||||||||| | | |||
Sbjct 1672719 CCGTGGTGTTCTCAAGATCTTCCTCGAAAACGT 1672687
>seq1
Length=3403828
Score = 95.1 bits (104), Expect = 2e-15
Identities = 103/137 (75%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 16487 GCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAA 16546
|||||||| ||||| || |||||||| || ||||||||| |||| || | |||| |||
Sbjct 1204467 GCTATCCGCCGTCTCGCCCGTCGTGGCGGTGTCAAGCGTATCTCAGGTCTTATCTACGAA 1204526
Query 16547 GAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTAT 16606
|||| |||| || | |||||||||||| ||| || || | ||| || || ||
Sbjct 1204527 GAGACACGTGGCGTCCTCAAGATCTTCCTCGAGAATGTCATTCGTGACTCTGTCACATAC 1204586
Query 16607 ACCGAGCACGCTAAACG 16623
|||||||| ||||| ||
Sbjct 1204587 ACCGAGCATGCTAAGCG 1204603
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075187199702
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |