Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457895.1_202015-11-
03] 14 sequences; 27,696,343 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq5 102 2e-16
>seq5
Length=2295515
Score = 102 bits (112), Expect = 2e-16
Identities = 154/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 363736 TACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGAC 363795
|||||| ||| || ||||| || ||||| | ||||||||||| || | || |||
Sbjct 537269 TACATTGCCGGTACCAATGGATATTCTAATGGTATTGTTCCCATGCTCCGCGCGTACGAC 537328
Query 363796 AATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTAT 363855
| ||||| | || ||||| || || || || | | || || || || || |||
Sbjct 537329 GAGACTGCTCGCTATGTCGATCAAGGCGGTAACAAACTCCTGGGCGCTTTCGCAATCTAT 537388
Query 363856 CTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAA 363915
| ||||| |||||||||| | |||||| | || ||||| |||||| || ||
Sbjct 537389 ATTGAGCCATGGCATGCCGATACATATGAGTTCGTCGACCTCCGTAAAAACCACGGCAAG 537448
Query 363916 GAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGG 363954
|||||| | ||||||| || || |||||||||||||||
Sbjct 537449 GAGGAAGTTTGTGCACGCGACCTCTTCTATGCACTTTGG 537487
Score = 96.9 bits (106), Expect = 9e-15
Identities = 144/202 (71%), Gaps = 2/202 (1%)
Strand=Plus/Plus
Query 363754 GGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTC 363813
|||||||| || || | ||||||||||| || | | ||| ||||| | || |||
Sbjct 539201 GGATACTCCAACGGTATTGTTCCCATGCTCCGCGCATACGACGCGACTGCTCGCTATGTC 539260
Query 363814 GACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCC 363873
|| || || || |||||| || || ||||| || ||||| ||||| || |||
Sbjct 539261 GATCAAGGCGGTAACAAGCGCCCGGGTGCTTTTGCAATCTATCTTGAGCCATGGCACGCC 539320
Query 363874 GATATTTTTGAGTTTCTTGAGCTCCGGAAAAA-CACGGGAAAAGAGGAATTGCGTGCACG 363932
||||| | || || | || ||||| ||||| ||| || || |||||| | ||||||||
Sbjct 539321 GATATCTACGAATTCATCGACCTCCGTAAAAATCAC-GGCAAGGAGGAAGTCCGTGCACG 539379
Query 363933 TGATCTGTTCTATGCACTTTGG 363954
|| || |||||||| || |||
Sbjct 539380 CGACCTCTTCTATGCGCTCTGG 539401
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303353366210948
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |