Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457895.1_202015-11- 03] 14 sequences; 27,696,343 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq5 102 2e-16 >seq5 Length=2295515 Score = 102 bits (112), Expect = 2e-16 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 363736 TACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGAC 363795 |||||| ||| || ||||| || ||||| | ||||||||||| || | || ||| Sbjct 537269 TACATTGCCGGTACCAATGGATATTCTAATGGTATTGTTCCCATGCTCCGCGCGTACGAC 537328 Query 363796 AATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTAT 363855 | ||||| | || ||||| || || || || | | || || || || || ||| Sbjct 537329 GAGACTGCTCGCTATGTCGATCAAGGCGGTAACAAACTCCTGGGCGCTTTCGCAATCTAT 537388 Query 363856 CTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAA 363915 | ||||| |||||||||| | |||||| | || ||||| |||||| || || Sbjct 537389 ATTGAGCCATGGCATGCCGATACATATGAGTTCGTCGACCTCCGTAAAAACCACGGCAAG 537448 Query 363916 GAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGG 363954 |||||| | ||||||| || || ||||||||||||||| Sbjct 537449 GAGGAAGTTTGTGCACGCGACCTCTTCTATGCACTTTGG 537487 Score = 96.9 bits (106), Expect = 9e-15 Identities = 144/202 (71%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 363754 GGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTC 363813 |||||||| || || | ||||||||||| || | | ||| ||||| | || ||| Sbjct 539201 GGATACTCCAACGGTATTGTTCCCATGCTCCGCGCATACGACGCGACTGCTCGCTATGTC 539260 Query 363814 GACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCC 363873 || || || || |||||| || || ||||| || ||||| ||||| || ||| Sbjct 539261 GATCAAGGCGGTAACAAGCGCCCGGGTGCTTTTGCAATCTATCTTGAGCCATGGCACGCC 539320 Query 363874 GATATTTTTGAGTTTCTTGAGCTCCGGAAAAA-CACGGGAAAAGAGGAATTGCGTGCACG 363932 ||||| | || || | || ||||| ||||| ||| || || |||||| | |||||||| Sbjct 539321 GATATCTACGAATTCATCGACCTCCGTAAAAATCAC-GGCAAGGAGGAAGTCCGTGCACG 539379 Query 363933 TGATCTGTTCTATGCACTTTGG 363954 || || |||||||| || ||| Sbjct 539380 CGACCTCTTCTATGCGCTCTGG 539401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353366210948