Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457895.1_202015-11- 03] 14 sequences; 27,696,343 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq1 107 2e-18 >seq1 Length=3403828 Score = 107 bits (118), Expect = 2e-18 Identities = 148/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || ||||| |||||||| || ||||||||||||| | ||| | | ||||| | || Sbjct 2304914 TGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTCCGGCCATCCTCGAGCTGC 2304855 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 ||||||||| ||||||| |||||||| ||| || | |||||| || || || || Sbjct 2304854 TTGCCCGCAAAAATAAGGCGCTGTTGATCCGGTGGGATGCCCTCCTTATCCTGGATCTTC 2304795 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 ||| || || | | | |||||| | ||| |||| ||||||||| || || | Sbjct 2304794 GCT--TTGACATTATCGATTGTGTCGGACGACTCGACCTCCAAGGTGATGGTCTTGCCAG 2304737 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||| ||||| |||||||| Sbjct 2304736 TCAGGGTTTTCACAAAGATCTGCAT 2304712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405087930881860