Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457895.1_202015-11- 03] 14 sequences; 27,696,343 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq5 105 7e-18 >seq5 Length=2295515 Score = 105 bits (116), Expect = 7e-18 Identities = 167/238 (70%), Gaps = 6/238 (3%) Strand=Plus/Plus Query 94070 CCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCA 94129 |||||||| ||||||||||| ||||||||| | || || |||||||| | | Sbjct 539181 CCTACATCGCTGGTACCAATGGATACTCCAACGGTATTGTTCCCATGCTCCGCGCAT--- 539237 Query 94130 ACAACGCG---GCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGG 94186 || ||||| || ||||| || || || || ||| | | | |||| |||| || Sbjct 539238 ACGACGCGACTGCTCGCTATGTCGATCAAGGCGGTAACAAGCGCCCGGGTGCTTTTGCAA 539297 Query 94187 TCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACG 94246 ||||||| ||||| |||||||| || | | | ||||||||||| || || || |||| Sbjct 539298 TCTATCTTGAGCCATGGCACGCCGATATCTACGAATTCATCGACCTCCGTAAAAATCACG 539357 Query 94247 GCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTT 94304 |||| || | | || | ||||||||||| || |||||| | || || ||||| Sbjct 539358 GCAAGGAGGAAGTCCGTGCACGCGACCTCTTCTATGCGCTCTGGATCCCCGATCTTTT 539415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494723113423440