Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457895.1_202015-11-
03] 14 sequences; 27,696,343 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq6 131 4e-25
seq1 118 2e-21
seq8 87.8 4e-12
>seq6
Length=2137015
Score = 131 bits (144), Expect = 4e-25
Identities = 152/205 (74%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 199422 CAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCA 199481
||||||| || || |||||| |||| |||||||||| || || | || || || |
Sbjct 301544 CAAGGTGAAGGGTGCTCTCCTTCTGGATATTGTAGTCAGACAGGGTGCGACCGTCCTCGA 301485
Query 199482 GCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAA 199541
||||||| || ||||| ||||| ||||||||||| ||| ||| ||||| |||||||
Sbjct 301484 GCTGCTTGCCCGCGAAAATGAGGCGCTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAA 301425
Query 199542 TCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTAC 199601
|||| ||| || |||| ||||| | | || || |||| |||||| |||||||
Sbjct 301424 TCTTCGCCTTGACATTGTCGATCGTGTCCGAAGACTCGACCTCCAGCGTGATTGTCTTAC 301365
Query 199602 CCGTGAGAGTTTTCACAAAAATTTG 199626
||||||| || || ||||| || ||
Sbjct 301364 CCGTGAGGGTCTTGACAAAGATCTG 301340
Score = 123 bits (136), Expect = 6e-23
Identities = 149/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 199424 AGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGC 199483
|| || |||||||||||||| |||| |||||||| | | ||| | |||||| || ||
Sbjct 301266 AGATGAAGAGTCGACTCCTTCTGGATATTGTAGTCCGAAAGAGTGCGTCCATCCTCGAGT 301207
Query 199484 TGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATC 199543
||||| || ||||| ||||| ||||||||||| || || || || |||||||||
Sbjct 301206 TGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGAATC 301147
Query 199544 TTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCC 199603
||| ||||||| |||| ||||| | | || || || | |||||||||||| ||
Sbjct 301146 TTTGCCTTCACGTTGTCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTCTTGCCA 301087
Query 199604 GTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || || || ||
Sbjct 301086 GTCAGGGTCTTGACGAAGATCTG 301064
Score = 120 bits (132), Expect = 7e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| || || | || |||||||| || | ||| ||||| | | ||| | || |||
Sbjct 301044 AGGACGAGATGCAAGGTGGACTCCTTCTGAATGTTATAGTCGGAAAGAGTGCGGCCGTCT 300985
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| || |||||||| | |||||||||||||| ||| || || ||
Sbjct 300984 TCGAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCCGGGGGAATGCCCTCCTTATCT 300925
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|||||||| ||||||| |||| ||||| | | || || || | ||| ||||||
Sbjct 300924 TGAATCTTCGCCTTCACGTTATCGATCGTGTCAGAAGACTCGACCTCGAGCGTAATCGTC 300865
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| |||||||| || || || ||||||||
Sbjct 300864 TTGCCCGTGAGGGTCTTGACGAAAATTTG 300836
Score = 114 bits (126), Expect = 3e-20
Identities = 147/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 199424 AGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGC 199483
|| || || ||||||||||| |||| ||| ||||| | | || | || || || |||
Sbjct 300469 AGATGAAGGGTCGACTCCTTCTGGATGTTATAGTCCGAAAGGGTGCGGCCGTCCTCGAGC 300410
Query 199484 TGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATC 199543
||||| || |||||||| | |||||||||||| || ||||| || |||||||||
Sbjct 300409 TGCTTGCCCGCGAAGATCAAACGCTGCTGGTCGGGGGGGATTCCCTCCTTGTCCTGAATC 300350
Query 199544 TTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCC 199603
|| ||||||| |||| ||||| | | || || || | ||||||||||| ||
Sbjct 300349 TTCGCCTTCACGTTATCGATCGTGTCCGAAGACTCCACCTCGAGGGTGATCGTCTTCCCA 300290
Query 199604 GTGAGAGTTTTCACAAAAATTTG 199626
||||| || ||||| || || ||
Sbjct 300289 GTGAGGGTCTTCACGAAGATCTG 300267
Score = 100 bits (110), Expect = 7e-16
Identities = 142/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486
||||| ||||||||||| || | ||| ||||||| | || | || || || ||||||
Sbjct 300753 TGGAGGGTCGACTCCTTCTGAATGTTATAGTCAGAAAGGGTGCGGCCGTCCTCGAGCTGC 300694
Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546
|| || |||||||| | ||||||||||| || || || || ||||| |||||
Sbjct 300693 TTGCCCGCGAAGATCAAGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTG 300634
Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606
||| ||| |||| ||||| | || || || || | |||||||||||| || ||
Sbjct 300633 GCCTTGACGTTATCGATCGTGTCAGATGACTCCACCTCGAGCGTGATCGTCTTTCCAGTC 300574
Query 199607 AGAGTTTTCACAAAAATTTG 199626
| || ||||| || || ||
Sbjct 300573 AACGTCTTCACGAAGATCTG 300554
>seq1
Length=3403828
Score = 118 bits (130), Expect = 2e-21
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | ||||||||||| || ||||||||||| |||| ||||||||| | | |||
Sbjct 2304932 CGAAGACGGAGGACAAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTC 2304873
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| || |||||||| || || || || || ||||| || ||||| || ||
Sbjct 2304872 CGGCCATCCTCGAGCTGCTTGCCCGCAAAAATAAGGCGCTGTTGATCCGGTGGGATGCCC 2304813
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| || || |||| ||||| | | || || |||||
Sbjct 2304812 TCCTTATCCTGGATCTTCGCTTTGACATTATCGATTGTGTCGGACGACTCGACCTCCAAG 2304753
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| || || || ||||||||||| || ||
Sbjct 2304752 GTGATGGTCTTGCCAGTCAGGGTTTTCACAAAGATCTG 2304715
Score = 113 bits (124), Expect = 1e-19
Identities = 148/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 199422 CAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCA 199481
||||||| | ||| ||||| || || | ||||| || | | ||| | ||||| ||||
Sbjct 2304634 CAAGGTGCAAAGTAGACTCTTTCTGAATATTGTAATCGGAGAGAGTTCGCCCATCCTCCA 2304575
Query 199482 GCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAA 199541
||||||||| |||||||| | || |||||||| ||| ||| ||||| |||||||
Sbjct 2304574 ACTGCTTTCCAGCGAAGATCAACCGTTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAA 2304515
Query 199542 TCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTAC 199601
|||| ||||||| || | ||||| | | || || || | ||||||||||| |
Sbjct 2304514 TCTTCGCCTTCACGTTGTCAATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTCTTCC 2304455
Query 199602 CCGTGAGAGTTTTCACAAAAATTTG 199626
|||| | ||| || || ||||| ||
Sbjct 2304454 CCGTCAAAGTCTTTACGAAAATCTG 2304430
Score = 102 bits (112), Expect = 2e-16
Identities = 83/101 (82%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||| |||||||||||||| |||| ||||||||| || |||| |||||
Sbjct 695996 AGGACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGTGTCCGGCCATCC 696055
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518
|| |||||||| || ||||||||||| |||||||| || ||
Sbjct 696056 TCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGATCAGG 696096
Score = 96.9 bits (106), Expect = 8e-15
Identities = 88/111 (79%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || | || ||| || || |||||||| ||||| |||| ||||||||||| ||| ||
Sbjct 2304137 CGGAGGCGCAAGACGAGATGAAGAGTCGATTCCTTCTGGATGTTGTAGTCAGACAATGTA 2304078
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGA 199519
| ||||| || ||||| ||||| ||||| |||||||| || ||||| |||
Sbjct 2304077 CGGCCATCCTCGAGCTGTTTTCCAGCGAAAATGAGACGTTGTTGGTCGGGA 2304027
Score = 95.1 bits (104), Expect = 3e-14
Identities = 144/205 (70%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 199422 CAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCA 199481
||||||| || || |||||||| |||| ||||| || | | || | ||||| || |
Sbjct 2304352 CAAGGTGAAGGGTAGACTCCTTCTGGATATTGTAATCGGAAAGCGTGCGCCCATCCTCAA 2304293
Query 199482 GCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAA 199541
|||| || || |||||||| |||||||||||||| ||| || || || |||||||
Sbjct 2304292 GCTGTTTACCAGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGAA 2304233
Query 199542 TCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTAC 199601
|||| ||| || |||| ||||| | | || || || | ||||| ||||| |
Sbjct 2304232 TCTTCGCCTTGACATTGTCGATAGTGTCCGAAGACTCCACTTCAAGAGTGATGGTCTTGC 2304173
Query 199602 CCGTGAGAGTTTTCACAAAAATTTG 199626
|||| | || || || || || ||
Sbjct 2304172 CCGTCAATGTCTTGACGAAGATCTG 2304148
Score = 84.2 bits (92), Expect = 5e-11
Identities = 66/79 (84%), Gaps = 0/79 (0%)
Strand=Plus/Plus
Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997
|||||||| |||||||||||||| ||||| | ||| | |||||||||| | ||||||
Sbjct 2304556 ATCTTCGCTGGAAAGCAGTTGGAGGATGGGCGAACTCTCTCCGATTACAATATTCAGAAA 2304615
Query 200998 GAGTCTACTCTTCACCTTG 201016
||||||||| | |||||||
Sbjct 2304616 GAGTCTACTTTGCACCTTG 2304634
>seq8
Length=1864753
Score = 87.8 bits (96), Expect = 4e-12
Identities = 80/101 (79%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|||||||||||||| || ||||||||||||| ||| || || | || | || |||
Sbjct 444651 AGGACAAGGTGGAGGGTAGACTCCTTTTGGATGTTATAATCGCTGAGGGTGCGACCGTCT 444710
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518
|| |||||||||||||| || || || ||||||||||| ||
Sbjct 444711 TCGAGCTGCTTTCCGGCAAAAATCAGGCGCTGCTGGTCGGG 444751
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178921388530938
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