Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457895.1_202015-11- 03] 14 sequences; 27,696,343 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq2 199 5e-46 >seq2 Length=3087500 Score = 199 bits (220), Expect = 5e-46 Identities = 256/353 (73%), Gaps = 0/353 (0%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||||||||| || || || || || || ||||| || |||||||| Sbjct 1769916 TCGAAGTCCTCACCACCCAAGTGGGTGTCACCGGCAGTGGCCTTGACCTCGAAGATACCC 1769857 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || ||| | | | || ||||| || || || || || || || || ||||| ||| Sbjct 1769856 TCCTCGATGGTAAGAAGAGACACATCGAAAGTTCCTCCTCCGAGATCGAAGATGAGGACG 1769797 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| || ||||| |||||||| ||||| ||||| || || || || || Sbjct 1769796 TTGCGCTCGCCGATCACCTTCTTGTCGAGACCATACGCAATAGCGGCGGCGGTGGGCTCG 1769737 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || ||||||||||| ||||| || | || ||| | || || || || || || || Sbjct 1769736 TTGATAATACGAAGGATGTTCATTCCGGAGATGGTTCCGGCGTCCTTGGTAGCCTGACGC 1769677 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 ||||| ||||| ||||| || || ||||| ||||| |||| |||||| || | ||||| Sbjct 1769676 TGCGAGTCGTTGAAGTACGCAGGCACCGTCACGACGGCGTTCGTGACGGTCGTGCCGAGG 1769617 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 || || || ||| | || ||||| || ||||||||||| || |||||||| Sbjct 1769616 TAAGACTCAGCGGTCTCCTTCATCTTCAAGAGAACCATCGAGGAGATCTCTTC 1769564 Score = 140 bits (154), Expect = 4e-28 Identities = 193/268 (72%), Gaps = 4/268 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||||||||| || || || ||||| || ||||| | |||| ||| Sbjct 888423 TCGAAGTCCTCACCACCCAAGTGGGTGTCGCCGGCGGTGGCCTTGACGGCGAAGACACCG 888482 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || ||||| | | ||| ||||| || || || ||||| || || || ||||| ||| Sbjct 888483 CCGCTGATGTTGAGGAGCGAGACATCGAAAGTTCCTCCACCGAGATCGAAGATGAGGACG 888542 Query 7577 TTCGTATCGTCGTCTTTG--TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634 || ||| ||||| | | || ||||||||||| ||||| || || || || || | Sbjct 888543 TTGCGCTCG--GTCTTCGATTGCTGGTCGAGACCGTATGCGATGGCGGCGGCGGTGGGCT 888600 Query 7635 CATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 | || || ||||| || || |||||||| || | | || || || ||||| | | Sbjct 888601 CGTTGATGATACGGAGCACGTCGAGGCCAGCGATGGCGCCGGCGTCCTTGGTCGCGAGAC 888660 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGAC 7722 | ||||| ||||| |||||||| ||||| Sbjct 888661 GCTGCGAGTCGTTGAAGTAGGCAGGGAC 888688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132688851760