Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457895.1_202015-11- 03] 14 sequences; 27,696,343 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq6 107 2e-18 >seq6 Length=2137015 Score = 107 bits (118), Expect = 2e-18 Identities = 207/300 (69%), Gaps = 8/300 (3%) Strand=Plus/Plus Query 30046 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCC--- 30102 |||||||| |||| || |||||| || | ||| |||||| |||| ||| | | Sbjct 2112709 GGGTTCCAAGCGCTCAAGATGATTCGGCGGTCAG-TGGGTTCCTCCT--TGATCTTCCGA 2112765 Query 30103 ACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTC-TGCCCTCATGTCCGTGTA 30161 | | | | | | || |||||||| ||| || | ||||| | | || ||| || Sbjct 2112766 ATGACCTCTCGGAGTTGATCCACGCCCTCTCCGGTATAGTCCTTTTCGCAA-TCCACATA 2112824 Query 30162 CTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT 30221 || || || |||||||||||||| ||||||||||| || ||||| ||||| || || Sbjct 2112825 CTTCGCACCAAAATGCCTCCACTGAAACCCGTACACAGGACCCAGATCTCCTTCCCGTCT 2112884 Query 30222 GTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTAC 30281 ||| ||| || | ||| || ||||| || | || || || ||||||| || || || Sbjct 2112885 GTGACCGAGCCCTCGCTTCTCTAAAAATTCCTTTGACCCATTCCCGTCCCAAATTTTCAC 2112944 Query 30282 CCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTC 30341 |||||| ||||| |||||| ||||| ||| | || ||||| || ||||| || Sbjct 2112945 GGCCTTCTTTGAGAGAATAGTGGAGTCCGTGGAGCCTTTCACAAACCAGAGAAGCTCTTC 2113004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408617530279622