Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457895.1_202015-11- 03] 14 sequences; 27,696,343 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq6 129 4e-25 seq1 114 8e-21 >seq6 Length=2137015 Score = 129 bits (142), Expect = 4e-25 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||||| ||||||||||||||| || || ||||| || ||| |||| | || || || Sbjct 301542 AGGTGAAGGGTGCTCTCCTTCTGGATATTGTAGTCAGACAGGGTGCGACCGTCCTCGAGC 301483 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 ||||| || ||||| || || || |||||||| | || | ||| |||||||| | || Sbjct 301482 TGCTTGCCCGCGAAAATGAGGCGCTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAATC 301423 Query 34892 TTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951 || ||||| | |||| || | |||||| || | || || ||||| ||| Sbjct 301422 TTCGCCTTGACATTGTCGATCGTGTCCGAAGACTCGACCTCCAGCGTGATTGTCTTACCC 301363 Query 34952 GTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||||||||| |||||||||||||| Sbjct 301362 GTGAGGGTCTTGACAAAGATCTGCAT 301337 Score = 122 bits (134), Expect = 6e-23 Identities = 162/223 (73%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 34760 AACCTCA---GGACC-AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCT 34815 ||||||| | ||| || |||| ||| ||||||||| |||||||||||||| ||| | Sbjct 300485 AACCTCAAACGCACCGAGATGAAGGGTCGACTCCTTCTGGATGTTATAGTCCGAAAGGGT 300426 Query 34816 GCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCC 34875 ||| | || || || ||||| || |||||||||| || |||||||| | || | || Sbjct 300425 GCGGCCGTCCTCGAGCTGCTTGCCCGCGAAGATCAAACGCTGCTGGTCGGGGGGGATTCC 300366 Query 34876 CTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAAC 34935 ||||||||| | || || || ||| | |||| || | ||| || || | Sbjct 300365 CTCCTTGTCCTGAATCTTCGCCTTCACGTTATCGATCGTGTCCGAAGACTCCACCTCGAG 300306 Query 34936 GGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||| || ||||| || ||||||||||| || |||||||||||| Sbjct 300305 GGTGATCGTCTTCCCAGTGAGGGTCTTCACGAAGATCTGCATG 300263 Score = 118 bits (130), Expect = 7e-22 Identities = 142/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| || || |||||||| || |||| |||| || |||||||| || ||||| Sbjct 301252 CTCCTTCTGGATATTGTAGTCCGAAAGAGTGCGTCCATCCTCGAGTTGCTTGCCAGCGAA 301193 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 || || || |||||||| |||| | ||||||||||| | || ||| || ||| Sbjct 301192 AATGAGGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGAATCTTTGCCTTCACGTT 301133 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| ||| | |||||| || | || || ||||| || || |||||||| || Sbjct 301132 GTCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTCTTGCCAGTCAGGGTCTTGAC 301073 Query 34966 AAAGATCTGCATG 34978 |||||||||||| Sbjct 301072 GAAGATCTGCATG 301060 Score = 116 bits (128), Expect = 2e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || || | |||| ||||||||||||||||||||| || || |||| | || Sbjct 301044 AGGACGAGATGCAAGGTGGACTCCTTCTGAATGTTATAGTCGGAAAGAGTGCGGCCGTCT 300985 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || |||||||||| || |||||||| | || | |||||||| || Sbjct 300984 TCGAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCCGGGGGAATGCCCTCCTTATCT 300925 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | |||| ||| | |||||| || | || || ||| Sbjct 300924 TGAATCTTCGCCTTCACGTTATCGATCGTGTCAGAAGACTCGACCTCGAGCGTAATCGTC 300865 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || |||||||||||||| || || || ||||| Sbjct 300864 TTGCCCGTGAGGGTCTTGACGAAAATTTGCAT 300833 Score = 114 bits (126), Expect = 8e-21 Identities = 141/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||||||||| || ||| |||| | || || || ||||| || ||||| Sbjct 300742 CTCCTTCTGAATGTTATAGTCAGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAA 300683 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| || |||||||| | || | ||||||||||| | || || |||||| Sbjct 300682 GATCAAGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 300623 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| ||| | ||| || || | || || |||||||| || | ||||| || Sbjct 300622 ATCGATCGTGTCAGATGACTCCACCTCGAGCGTGATCGTCTTTCCAGTCAACGTCTTCAC 300563 Query 34966 AAAGATCTGCATG 34978 |||||||||||| Sbjct 300562 GAAGATCTGCATG 300550 >seq1 Length=3403828 Score = 114 bits (126), Expect = 8e-21 Identities = 154/212 (73%), Gaps = 8/212 (4%) Strand=Plus/Minus Query 34770 CCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCA 34829 |||| || | ||||||||| ||||||||||| || ||||| || |||| | || |||| Sbjct 2305147 CCAGATGGAGGGTGCTCTCTTTCTGAATGTTGTAATCCGAAAGTGTGCGACCGTCCTCCA 2305088 Query 34830 GTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTA 34889 |||||| || || || ||||| ||||||||||| |||| | || |||||||| | | Sbjct 2305087 ATTGCTTGCCCGCAAAAATCAGGCGTTGCTGGTCCGGCGGGATGCCTTCCTTGTCTTGAA 2305028 Query 34890 TTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || || ||||||| || | ||| || || | || || ||| Sbjct 2305027 TCTTCGCCTTCAC--AT--TATCGATCGTGTCCGAAGACTCTACCTCCAACGTGATTGTC 2304972 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||||||||| || ||||||||||| Sbjct 2304971 TTGCCTGTGAGGGTCTTGACGAAGATCTGCAT 2304940 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| || ||||||||| ||||| ||||| || ||| | || |||| Sbjct 2304923 AGGACAAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTCCGGCCATCC 2304864 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || || || || || || || || || | || | |||||||| || Sbjct 2304863 TCGAGCTGCTTGCCCGCAAAAATAAGGCGCTGTTGATCCGGTGGGATGCCCTCCTTATCC 2304804 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGC----CTCGACATCAACGGTTAT 34941 | || || |||||| || |||||||| | | |||||| || | ||| || Sbjct 2304803 TGGATCTTCGCTTTGAC--AT--TATCGATTGTGTCGGACGACTCGACCTCCAAGGTGAT 2304748 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||| || || ||||| || |||||||||||||| Sbjct 2304747 GGTCTTGCCAGTCAGGGTTTTCACAAAGATCTGCAT 2304712 Score = 100 bits (110), Expect = 2e-16 Identities = 150/211 (71%), Gaps = 8/211 (4%) Strand=Plus/Minus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||||| ||| ||||||||| || || || || || || ||||| |||| || || Sbjct 2304350 AGGTGAAGGGTAGACTCCTTCTGGATATTGTAATCGGAAAGCGTGCGCCCATCCTCAAGC 2304291 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 || || || |||||||| || || |||||||| | || | ||||||||||| | || Sbjct 2304290 TGTTTACCAGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGAATC 2304231 Query 34892 TTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTT 34947 || ||||| || | ||||| || | ||| || |||| || |||||||| Sbjct 2304230 TTCGCCTTGAC--AT--TGTCGATAGTGTCCGAAGACTCCACTTCAAGAGTGATGGTCTT 2304175 Query 34948 TCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||| | ||||| || |||||||||||| Sbjct 2304174 GCCCGTCAATGTCTTGACGAAGATCTGCATG 2304144 Score = 96.9 bits (106), Expect = 2e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||| |||||||| || || || || || | ||| |||| |||| |||||||| ||||| Sbjct 2304618 CTCTTTCTGAATATTGTAATCGGAGAGAGTTCGCCCATCCTCCAACTGCTTTCCAGCGAA 2304559 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| ||||||||||| | || | ||| |||||||| | || || || ||| Sbjct 2304558 GATCAACCGTTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAATCTTCGCCTTCACGTT 2304499 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | || | |||||| || | || || ||||| ||||| | |||||||| Sbjct 2304498 GTCAATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTCTTCCCCGTCAAAGTCTTTAC 2304439 Query 34966 AAAGATCTGCATG 34978 || ||||||||| Sbjct 2304438 GAAAATCTGCATG 2304426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692744428666