Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457895.1_202015-11- 03] 14 sequences; 27,696,343 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 2e-11 seq5 82.4 7e-11 >seq1 Length=3403828 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || |||||||||||| | ||| || ||| |||||||| || || | | Sbjct 2304905 GACTCCTTCTGGATGTTGTAGTCGGAAAGGGTCCGGCCATCCTCGAGCTGCTTGCCCGCA 2304846 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 | || || ||||||||||| || || ||||| || ||||| || || ||| | Sbjct 2304845 AAAATAAGGCGCTGTTGATCCGGTGGGATGCCCTCCTTATCCTGGATCTTCGCTTTGACA 2304786 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || |||| || ||| || || | || | || || |||||||| ||||| Sbjct 2304785 TTATCGATTGTGTCGGACGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTTTTC 2304726 Query 132110 ATGAAAATCTGCAT 132123 | || |||||||| Sbjct 2304725 ACAAAGATCTGCAT 2304712 >seq5 Length=2295515 Score = 82.4 bits (90), Expect = 7e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 148120 TCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTT 148179 || ||| ||| | ||| | || || || |||||||| | || ||| ||| | | || Sbjct 536785 TCAATGGAGTCATCTTTCATGCAAACCAGGAAACACGAGCTCAATTGAGGATTGGGTGTA 536726 Query 148180 CCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATAC 148239 ||||| ||| || || || ||||| || || | || ||||| | || Sbjct 536725 CCCGCGTTGAAGAGTGTTGGTGAGGCGTGAGTGAAGTAACGTTCGGACATCAGGTTGTAG 536666 Query 148240 GTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATG 148299 || ||||||||| |||| || ||||||||||||| | || |||||||||| |||| Sbjct 536665 GTTTCAATAGCGCGATCGACATCAGCGCCGTGAATGCCGACAGCTACGCGCATGATCATG 536606 Query 148300 TGCTGTGGTCGTTCGGCAAC 148319 |||||||| ||||| || || Sbjct 536605 TGCTGTGGACGTTCTGCGAC 536586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476611116593040