Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457895.1_202015-11- 03] 14 sequences; 27,696,343 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq6 127 2e-24 seq1 123 2e-23 >seq6 Length=2137015 Score = 127 bits (140), Expect = 2e-24 Identities = 153/208 (74%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 35529 CCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCA 35588 ||||||| | || |||||| |||||||| || || | | ||| || |||| || | Sbjct 300758 CCAAATGGAGGGTCGACTCCTTCTGAATGTTATAGTCAGAAAGGGTGCGGCCGTCCTCGA 300699 Query 35589 GCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGA 35648 ||||||| ||||| || ||||| ||||||||||| | || | || |||||||||| || Sbjct 300698 GCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGA 300639 Query 35649 TCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTAC 35708 |||| ||| | | | | |||||| || |||||||| | ||||||||| || | Sbjct 300638 TCTTGGCCTTGACGTTATCGATCGTGTCAGATGACTCCACCTCGAGCGTGATCGTCTTTC 300579 Query 35709 CCGTCAAAGTTTTCACAAATATCTGCAT 35736 | ||||| || ||||| || |||||||| Sbjct 300578 CAGTCAACGTCTTCACGAAGATCTGCAT 300551 Score = 120 bits (132), Expect = 3e-22 Identities = 146/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599 || |||||||| || || ||||| || | || ||| || |||| || |||||||| ||| Sbjct 301533 GTGCTCTCCTTCTGGATATTGTAGTCAGACAGGGTGCGACCGTCCTCGAGCTGCTTGCCC 301474 Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659 || || || | ||||||||||| | ||||| | ||||||||| ||||| ||| Sbjct 301473 GCGAAAATGAGGCGCTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAATCTTCGCCTTG 301414 Query 35660 AGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTT 35719 | | | | | |||||| || || ||||||| |||||| || |||||||| | || Sbjct 301413 ACATTGTCGATCGTGTCCGAAGACTCGACCTCCAGCGTGATTGTCTTACCCGTGAGGGTC 301354 Query 35720 TTCACAAATATCTGCATTC 35738 || ||||| |||||||||| Sbjct 301353 TTGACAAAGATCTGCATTC 301335 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||| || || | | ||| || |||| || |||||||| ||||| || Sbjct 300455 CTCCTTCTGGATGTTATAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAA 300396 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| ||||||||||| | || | | |||||||||| ||||| ||||| | Sbjct 300395 GATCAAACGCTGCTGGTCGGGGGGGATTCCCTCCTTGTCCTGAATCTTCGCCTTCACGTT 300336 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || |||||||| | |||||||| || || || | || ||||| Sbjct 300335 ATCGATCGTGTCCGAAGACTCCACCTCGAGGGTGATCGTCTTCCCAGTGAGGGTCTTCAC 300276 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 300275 GAAGATCTGCAT 300264 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| |||||||| || |||| | || || |||| || |||||||| ||||| || Sbjct 301024 CTCCTTCTGAATGTTATAGTCGGAAAGAGTGCGGCCGTCTTCGAGCTGCTTGCCCGCGAA 300965 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| ||||||||||||| |||| || |||||| || ||||| ||||| | Sbjct 300964 GATCAAGCGCTGCTGGTCCGGGGGAATGCCCTCCTTATCTTGAATCTTCGCCTTCACGTT 300905 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || || ||||| | ||| ||||| || ||||| | || || || Sbjct 300904 ATCGATCGTGTCAGAAGACTCGACCTCGAGCGTAATCGTCTTGCCCGTGAGGGTCTTGAC 300845 Query 35725 AAATATCTGCAT 35736 || || ||||| Sbjct 300844 GAAAATTTGCAT 300833 Score = 89.7 bits (98), Expect = 5e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || || ||||| || | | || || | || || || ||||| || || || Sbjct 301252 CTCCTTCTGGATATTGTAGTCCGAAAGAGTGCGTCCATCCTCGAGTTGCTTGCCAGCGAA 301193 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | || | | |||||||||| |||||| ||||| || Sbjct 301192 AATGAGGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGAATCTTTGCCTTCA-CGT 301134 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| ||| || ||||| | ||||||||| || || |||| || || | Sbjct 301133 TGTCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTCTTGCCAGTCAGGGTCTTGA 301074 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 301073 CGAAGATCTGCAT 301061 >seq1 Length=3403828 Score = 123 bits (136), Expect = 2e-23 Identities = 157/212 (74%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 35527 CACCAAA-TGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGT 35585 |||||| || || ||| ||| || ||||| |||||||||| | |||||| | || | Sbjct 2304637 CACCAAGGTGCAAAGTAGACTCTTTCTGAATATTGTAATCGGAGAGAGTTCGCCCATCCT 2304578 Query 35586 CCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCA 35645 ||| |||||| || || || |||||||| |||||||| | ||||| | ||||||||| Sbjct 2304577 CCAACTGCTTTCCAGCGAAGATCAACCGTTGCTGGTCGGGAGGAATCCCTTCCTTGTCCT 2304518 Query 35646 TGATCTTTTGCTTCAGAGTTGCCACC-GTGTCGCTCGATTCCACCTCCACCGTGATCGTT 35704 ||||| ||||| |||| || ||||| || || ||||| | |||||||| Sbjct 2304517 GAATCTTCGCCTTCAC-GTTGTCAATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTC 2304459 Query 35705 TTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || ||||||||||| || || || |||||||| Sbjct 2304458 TTCCCCGTCAAAGTCTTTACGAAAATCTGCAT 2304427 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| | ||| || | || || |||||||| |||||||| Sbjct 2304903 CTCCTTCTGGATGTTGTAGTCGGAAAGGGTCCGGCCATCCTCGAGCTGCTTGCCCGCAAA 2304844 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||| || |||| || | || |||||| ||| |||||| || | | | Sbjct 2304843 AATAAGGCGCTGTTGATCCGGTGGGATGCCCTCCTTATCCTGGATCTTCGCTTTGACATT 2304784 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| ||| || ||||||| ||||| || || || |||| |||||||| Sbjct 2304783 ATCGATTGTGTCGGACGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTTTTCAC 2304724 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 2304723 AAAGATCTGCAT 2304712 Score = 105 bits (116), Expect = 6e-18 Identities = 148/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 35529 CCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCA 35588 ||| ||| | || ||||| || |||||||||||||| | | || || |||| |||| Sbjct 2305147 CCAGATGGAGGGTGCTCTCTTTCTGAATGTTGTAATCCGAAAGTGTGCGACCGTCCTCCA 2305088 Query 35589 GCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGA 35648 ||||| |||||||| |||| || |||||||||| || | || |||||||| | Sbjct 2305087 ATTGCTTGCCCGCAAAAATCAGGCGTTGCTGGTCCGGCGGGATGCCTTCCTTGTCTTGAA 2305028 Query 35649 TCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTAC 35708 |||| ||||| | | | | |||||| || || ||||||| |||||| || || | Sbjct 2305027 TCTTCGCCTTCACATTATCGATCGTGTCCGAAGACTCTACCTCCAACGTGATTGTCTTGC 2304968 Query 35709 CCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || | || || || || |||||||| Sbjct 2304967 CTGTGAGGGTCTTGACGAAGATCTGCAT 2304940 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || || |||||||||| | || ||| | || || ||||| ||||| || || Sbjct 2304336 CTCCTTCTGGATATTGTAATCGGAAAGCGTGCGCCCATCCTCAAGCTGTTTACCAGCGAA 2304277 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | ||| | | |||||||||| ||||| ||| | | | Sbjct 2304276 GATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGAATCTTCGCCTTGACATT 2304217 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || ||||| || | ||||| || || |||||||| || || || Sbjct 2304216 GTCGATAGTGTCCGAAGACTCCACTTCAAGAGTGATGGTCTTGCCCGTCAATGTCTTGAC 2304157 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 2304156 GAAGATCTGCAT 2304145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793521111120