Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457895.1_202015-11- 03] 14 sequences; 27,696,343 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq1 150 5e-31 seq6 123 8e-23 >seq1 Length=3403828 Score = 150 bits (166), Expect = 5e-31 Identities = 158/208 (76%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| || | |||||||||||| |||||||| ||||| || | ||||||||||| || | Sbjct 2304634 CAAGGTGCAAAGTAGACTCTTTCTGAATATTGTAATCGGAGAGAGTTCGCCCATCCTCCA 2304575 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 || |||||||| ||||| | |||||||| || |||||||| ||||| || ||||||| Sbjct 2304574 ACTGCTTTCCAGCGAAGATCAACCGTTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAA 2304515 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 | || || || || || ||||| | || || | || || || || || | ||||| | Sbjct 2304514 TCTTCGCCTTCACGTTGTCAATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTCTTCC 2304455 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || | || ||||| ||||||||||| Sbjct 2304454 CCGTCAAAGTCTTTACGAAAATCTGCAT 2304427 Score = 93.3 bits (102), Expect = 1e-13 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 140529 ACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCA 140588 || ||||||||||| || || || || || || || ||||| ||||| || ||||| || Sbjct 2304125 ACGAGATGAAGAGTCGATTCCTTCTGGATGTTGTAGTCAGACAATGTACGGCCATCCTCG 2304066 Query 140589 AGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAAT 140632 || ||||||||||| || || |||||||| || || |||||||| Sbjct 2304065 AGCTGTTTTCCAGCGAAAATGAGACGTTGTTGGTCGGGAGGAAT 2304022 >seq6 Length=2137015 Score = 123 bits (136), Expect = 8e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 140532 AGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGT 140591 ||||||||||| ||||| || || ||||| || || || | || || ||||| || ||| Sbjct 301266 AGATGAAGAGTCGACTCCTTCTGGATATTGTAGTCCGAAAGAGTGCGTCCATCCTCGAGT 301207 Query 140592 TGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATT 140651 || || ||||| || || || || ||||| ||||| || || || || || |||||||| Sbjct 301206 TGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGAATC 301147 Query 140652 TTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCG 140711 || || || || || || |||| ||||| | || || || || || | ||||| || Sbjct 301146 TTTGCCTTCACGTTGTCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTCTTGCCA 301087 Query 140712 GTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || || |||||||| Sbjct 301086 GTCAGGGTCTTGACGAAGATCTGCAT 301061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515254128201242