Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457955.1_202015-11-
03] 14 sequences; 27,988,318 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq6 105 8e-18
>seq6
Length=2247897
Score = 105 bits (116), Expect = 8e-18
Identities = 183/263 (70%), Gaps = 5/263 (2%)
Strand=Plus/Plus
Query 145963 GGGTTCCTC-TTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTA 146021
||||||||| ||||||| || || | || | ||| || |||||||||| | ||||||
Sbjct 2221472 GGGTTCCTCCTTGATCTTCCGAATGACCTCTCGGAGTTGATCCACGCCCT--CTCCGGTA 2221529
Query 146022 A--TCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACG 146079
|| | | | | ||||| ||| || || || ||||||||||| |||||||| ||
Sbjct 2221530 TAGTCCTTTTCGCAATCCACATACTTCGCACCAAAATGCCTCCACTGAAACCCGTACACA 2221589
Query 146080 GGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGAC 146139
|| ||||| || || | ||||| || ||||| | | | || ||| |||
Sbjct 2221590 GGACCCAGATCTCCTTCCCGTCTGTGACCGAGCCCTCGCTTCTCTAAAAATTCCTTTGAC 2221649
Query 146140 CCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCC 146199
|| || ||||||| || || ||| || || ||||| | ||||||||||||| ||
Sbjct 2221650 CCATTCCCGTCCCAAATTTTCACGGCCTTCTTTGAGAGAATAGTGGAGTCCGTGGAGCCT 2221709
Query 146200 CTGATGAACCAGAGCAGCTCTTC 146222
| | |||||||| ||||||||
Sbjct 2221710 TTCACAAACCAGAGAAGCTCTTC 2221732
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590076696736560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |