Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457955.1_202015-11-
03] 14 sequences; 27,988,318 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq5 96.9 7e-15
>seq5
Length=2330625
Score = 96.9 bits (106), Expect = 7e-15
Identities = 185/273 (68%), Gaps = 0/273 (0%)
Strand=Plus/Plus
Query 248826 CTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGA 248885
||||| |||||| ||| ||||| || || || || || ||||| ||| ||
Sbjct 511510 CTTTGGTTTCAAGACGTTGGAGCGCTCTTACCTTCTTCGGATCAATGGCCGTGTCGCAGA 511569
Query 248886 ACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAG 248945
||| ||||||||| | ||||| || |||||||| |||||| | ||| | || |
Sbjct 511570 ACGTCCACAGCACATGATCATGCGCGTAGCTGTCGGCATTCACGGCGCTGATGTCGATCG 511629
Query 248946 CGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACGCT 249005
|| | || || |||| | ||| ||||| | | || || ||| |||| || ||
Sbjct 511630 CGCTATTGAAACCTACAACCTGATGTCCGAACGTTACTTCACTCACGCCTCACCAACACT 511689
Query 249006 CTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGA 249065
||||||||| ||||| ||| ||| |||||||||| || || || |||| ||||
Sbjct 511690 CTTCAACGCGGGTACACCCAATCCTCAATTGAGCTCGTGTTTCCTGGTTTGCATGAAAGA 511749
Query 249066 CGACTCTGTCGACGGCATTTATGACACGCTTAA 249098
||||| | || || || ||||| || || ||
Sbjct 511750 TGACTCCATTGAGGGAATCTATGAAACTCTCAA 511782
Score = 96.9 bits (106), Expect = 7e-15
Identities = 185/273 (68%), Gaps = 0/273 (0%)
Strand=Plus/Plus
Query 248826 CTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGA 248885
||||| |||||| ||| ||||| || || || || || ||||| ||| ||
Sbjct 512107 CTTTGGTTTCAAGACGTTGGAGCGCTCTTACCTTCTTCGGATCAATGGCCGTGTCGCAGA 512166
Query 248886 ACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAG 248945
||| ||||||||| | ||||| || |||||||| |||||| | ||| | || |
Sbjct 512167 ACGTCCACAGCACATGATCATGCGCGTAGCTGTCGGCATTCACGGCGCTGATGTCGATCG 512226
Query 248946 CGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACGCT 249005
|| | || || |||| | ||| ||||| | | || || ||| |||| || ||
Sbjct 512227 CGCTATTGAAACCTACAACCTGATGTCCGAACGTTACTTCACTCACGCCTCACCAACACT 512286
Query 249006 CTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGA 249065
||||||||| ||||| ||| ||| |||||||||| || || || |||| ||||
Sbjct 512287 CTTCAACGCGGGTACACCCAATCCTCAATTGAGCTCGTGTTTCCTGGTTTGCATGAAAGA 512346
Query 249066 CGACTCTGTCGACGGCATTTATGACACGCTTAA 249098
||||| | || || || ||||| || || ||
Sbjct 512347 TGACTCCATTGAGGGAATCTATGAAACTCTCAA 512379
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073766207393152
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |