Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457955.1_202015-11- 03] 14 sequences; 27,988,318 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq5 91.5 3e-13 >seq5 Length=2330625 Score = 91.5 bits (100), Expect = 3e-13 Identities = 169/248 (68%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851 || ||||| |||||| ||| || || | ||| ||||| ||||| || ||||||||| Sbjct 511815 CCACCAGCCGTCTTGCTGATCATGGCACAGTTCTTGAGAGTTTCATAGATTCCCTCAATG 511756 Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTTCCACAA 94911 ||||||| | || | ||||| |||||| | ||| || || ||| || Sbjct 511755 GAGTCATCTTTCATGCAAACCAGGAAACACGAGCTCAATTGAGGATTGGGTGTACCCGCG 511696 Query 94912 TTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTCA 94971 || || ||||| || || || || || || || | ||||| || | || |||||| Sbjct 511695 TTGAAGAGTGTTGGTGAGGCGTGAGTGAAGTAACGTTCGGACATCAGGTTGTAGGTTTCA 511636 Query 94972 ATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTGA 95031 || | | || || | ||||||||||||||||| || ||||| ||||||| ||| Sbjct 511635 ATAGCGCGATCGACATCAGCGCCGTGAATGCCGACAGCTACGCGCATGATCATGTGCTGT 511576 Query 95032 GGGCGCTC 95039 || || || Sbjct 511575 GGACGTTC 511568 Score = 91.5 bits (100), Expect = 3e-13 Identities = 169/248 (68%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851 || ||||| |||||| ||| || || | ||| ||||| ||||| || ||||||||| Sbjct 512412 CCACCAGCCGTCTTGCTGATCATGGCACAGTTCTTGAGAGTTTCATAGATTCCCTCAATG 512353 Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTTCCACAA 94911 ||||||| | || | ||||| |||||| | ||| || || ||| || Sbjct 512352 GAGTCATCTTTCATGCAAACCAGGAAACACGAGCTCAATTGAGGATTGGGTGTACCCGCG 512293 Query 94912 TTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTCA 94971 || || ||||| || || || || || || || | ||||| || | || |||||| Sbjct 512292 TTGAAGAGTGTTGGTGAGGCGTGAGTGAAGTAACGTTCGGACATCAGGTTGTAGGTTTCA 512233 Query 94972 ATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTGA 95031 || | | || || | ||||||||||||||||| || ||||| ||||||| ||| Sbjct 512232 ATAGCGCGATCGACATCAGCGCCGTGAATGCCGACAGCTACGCGCATGATCATGTGCTGT 512173 Query 95032 GGGCGCTC 95039 || || || Sbjct 512172 GGACGTTC 512165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583822493370