Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457955.1_202015-11- 03] 14 sequences; 27,988,318 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq1 100 2e-16 >seq1 Length=3258266 Score = 100 bits (110), Expect = 2e-16 Identities = 153/216 (71%), Gaps = 9/216 (4%) Strand=Plus/Minus Query 33160 CACCAAA-TGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG---- 33214 |||||| ||||| || |||||||| || ||||||||||| || | ||||| | Sbjct 2272418 CACCAAGGTGCAAAGTAGACTCTTTCTGAATATTGTAATCGGAGA----GAGTTCGCCCA 2272363 Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274 || ||||| ||||||||| || || || ||||||||||| | || || ||||| || Sbjct 2272362 TCCTCCAACTGCTTTCCAGCGAAGATCAACCGTTGCTGGTCGGGAGGAATCCCTTCCTTG 2272303 Query 33275 TCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATC 33334 || |||| | || || | | ||| ||||| | | || || ||||| ||| Sbjct 2272302 TCCTGAATCTTCGCCTTCACGTTGTCAATAGTGTCCGAAGACTCGACCTCGAGAGTGATC 2272243 Query 33335 GTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370 || || ||||| | ||| ||||||||||| |||||| Sbjct 2272242 GTCTTCCCCGTCAAAGTCTTTACGAAAATCTGCATG 2272207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318777545608572