Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457955.1_202015-11- 03] 14 sequences; 27,988,318 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq8 96.9 2e-15 >seq8 Length=1872454 Score = 96.9 bits (106), Expect = 2e-15 Identities = 82/102 (80%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 11429 AAATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCG 11488 ||| | || || || | |||| ||| ||||| | | |||||||||| |||||||| Sbjct 383917 AAAAAAAGGATAAAGACAAAAGTAAACTGGCCAACGTGGGGATCGAACCCAAGACCTTCG 383976 Query 11489 CGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||||||||||||||||| ||||||||||||| | ||||| Sbjct 383977 CGTTATTAGCACGACGCTCTAACCAACTGAGCTAGTCGGCCG 384018 Score = 95.1 bits (104), Expect = 6e-15 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 11429 AAATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCG 11488 ||| | || || || | |||| ||| ||||| | | |||||||||| |||||||| Sbjct 414645 AAAAAAAGGATAAAGACAAAAGGAAAGTGGCCAACGTGGGGATCGAACCCAAGACCTTCG 414586 Query 11489 CGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||||||||| ||||||||||||| | |||| Sbjct 414585 CGTTATTAGCACGACGCTCTAACCAACTGAGCTAGTCGGCC 414545 Score = 91.5 bits (100), Expect = 8e-14 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 11453 AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACC 11512 |||||||| | | |||||||||| |||||||||||||||||||||||||||| ||| Sbjct 418088 AATTGGCCAACGTGGGGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACC 418029 Query 11513 AACTGAGCTAATGGGCC 11529 |||||||||| | |||| Sbjct 418028 AACTGAGCTAGTCGGCC 418012 Score = 89.7 bits (98), Expect = 3e-13 Identities = 57/63 (90%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||||||||||||||||||||||||||| ||||||||||||| | || Sbjct 388159 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAGTCGG 388100 Query 11528 CCG 11530 ||| Sbjct 388099 CCG 388097 Lambda K H 0.638 0.410 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261491155383064