Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457955.1_202015-11- 03] 14 sequences; 27,988,318 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq8 120 5e-23 seq1 95.1 2e-15 >seq8 Length=1872454 Score = 120 bits (132), Expect = 5e-23 Identities = 120/153 (78%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||| |||| ||| |||||| || |||||||| || ||||| ||||| ||||| Sbjct 1691920 GCTAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGCATCACGAAGCCTGCTAT 1691862 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || || || |||||||| || || || ||| |||| || | |||| || |||| Sbjct 1691861 CCGCCGCCTCGCACGTCGTGGCGGTGTGAAACGTATCTCGGGCCTCATCTACGAGGAGAC 1691802 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGT 16584 |||| |||| | |||||||||||| | | ||| Sbjct 1691801 CCGTGGTGTTCTCAAGATCTTCCTCGAAAACGT 1691769 >seq1 Length=3258266 Score = 95.1 bits (104), Expect = 2e-15 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 16487 GCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAA 16546 |||||||| ||||| || |||||||| || ||||||||| |||| || | |||| ||| Sbjct 1172794 GCTATCCGCCGTCTCGCCCGTCGTGGCGGTGTCAAGCGTATCTCAGGTCTTATCTACGAA 1172853 Query 16547 GAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTAT 16606 |||| |||| || | |||||||||||| ||| || || | ||| || || || Sbjct 1172854 GAGACACGTGGCGTCCTCAAGATCTTCCTCGAGAATGTCATTCGTGACTCTGTCACATAC 1172913 Query 16607 ACCGAGCACGCTAAACG 16623 |||||||| ||||| || Sbjct 1172914 ACCGAGCATGCTAAGCG 1172930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075187199702