Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457955.1_202015-11- 03] 14 sequences; 27,988,318 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq3 84.2 2e-11 >seq3 Length=3164952 Score = 84.2 bits (92), Expect = 2e-11 Identities = 116/160 (73%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 119654 CACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATTCATAAACTCGAA 119713 ||| || || ||||| || || ||||| |||| | ||| || | | |||||| ||||| Sbjct 1889826 CACCCGCTTCTCAAAGAAGTTGGTCTTCCCCTGCAAAGAGATCATGTCCATAAAGTCGAA 1889885 Query 119714 AGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAGTCGATCTGCCAC 119773 || |||| | |||| | ||||| ||| || | | | | ||| || ||||| || Sbjct 1889886 GGGGTTTGTCGCGTTGTAGTGCTTTTCGCCACCGAGGGCAATGAGCAGACGGTCTGCAAC 1889945 Query 119774 AAACTCGATGTATTCGCACATG-GATTGCGAATTCATGCC 119812 |||||||||||| | ||||||| | ||| | ||||||||| Sbjct 1889946 AAACTCGATGTACTGGCACATGAGCTTG-GCATTCATGCC 1889984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478662316234080