Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457955.1_202015-11-
03] 14 sequences; 27,988,318 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq3 84.2 2e-11
>seq3
Length=3164952
Score = 84.2 bits (92), Expect = 2e-11
Identities = 116/160 (73%), Gaps = 2/160 (1%)
Strand=Plus/Plus
Query 119654 CACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATTCATAAACTCGAA 119713
||| || || ||||| || || ||||| |||| | ||| || | | |||||| |||||
Sbjct 1889826 CACCCGCTTCTCAAAGAAGTTGGTCTTCCCCTGCAAAGAGATCATGTCCATAAAGTCGAA 1889885
Query 119714 AGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAGTCGATCTGCCAC 119773
|| |||| | |||| | ||||| ||| || | | | | ||| || ||||| ||
Sbjct 1889886 GGGGTTTGTCGCGTTGTAGTGCTTTTCGCCACCGAGGGCAATGAGCAGACGGTCTGCAAC 1889945
Query 119774 AAACTCGATGTATTCGCACATG-GATTGCGAATTCATGCC 119812
|||||||||||| | ||||||| | ||| | |||||||||
Sbjct 1889946 AAACTCGATGTACTGGCACATGAGCTTG-GCATTCATGCC 1889984
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478662316234080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |