Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457955.1_202015-11-
03] 14 sequences; 27,988,318 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq6 125 7e-24
seq1 105 6e-18
seq8 95.1 1e-14
>seq6
Length=2247897
Score = 125 bits (138), Expect = 7e-24
Identities = 162/223 (73%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 131016 CAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCG 131075
|||||||| | | ||| | |||||||||||| || ||||| || || | ||||||
Sbjct 300519 CAAACGCACCG--AGATGAAGGGTCGACTCCTTCTGGATGTTATAGTCCGAAAGGGTGCG 300462
Query 131076 CGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTC 131135
|||||| ||||||||||| ||| |||| |||||||||||||| || |||||||||||
Sbjct 300461 GCCGTCCTCGAGCTGCTTGCCCGCGAAGATCAAACGCTGCTGGTCGGGGGGGATTCCTTC 300402
Query 131136 TTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGT 131195
||||| || ||| ||| | | || | || || | ||||| | |||| |||
Sbjct 300401 CTTGTCCTGAATCTTCGCCTTCACGTTATCGATGGTGTCCGAAGACTCCACCTCGAGGGT 300342
Query 131196 AACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238
| || || || || || || || ||||| ||||||||| ||
Sbjct 300341 GATCGTCTTCCCAGTGAGGGTCTTCACGAAGATCTGCATGTCT 300299
Score = 113 bits (124), Expect = 4e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 131029 AAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGC 131088
||||| | |||||||||||| |||||||| || || | |||||| |||||| |||
Sbjct 300795 AAATGGAGGGTCGACTCCTTCTGAATGTTATAGTCAGAAAGGGTGCGGCCGTCCTCGAGC 300736
Query 131089 TGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATT 131148
|||||||| ||| |||| || ||||||||||| || ||||| || || ||||| |||
Sbjct 300735 TGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATC 300676
Query 131149 TTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCG 131208
|| ||||| | || | || || | ||||| | |||| || | || || ||
Sbjct 300675 TTGGCCTTGACGTTATCGATCGTGTCAGATGACTCCACCTCGAGCGTGATCGTCTTTCCA 300616
Query 131209 GTTAGAGTTTTTACGAAAATCTGCATGACT 131238
|| | || || ||||| ||||||||| ||
Sbjct 300615 GTCAACGTCTTCACGAAGATCTGCATGCCT 300586
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||| || || | ||| || || | ||| | ||| |||||||| |||||||| || |||
Sbjct 301099 GCCTCCACGTAGACGAAGGACGAGATGCAAGGTGGACTCCTTCTGAATGTTATAGTCGGA 301040
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| ||||| ||| || ||||||||||| ||| |||| || |||||||||||||| ||
Sbjct 301039 AAGAGTGCGGCCGTCTTCGAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCCGGGGG 300980
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| || || || || || ||| ||| | | || | || || | |||||||
Sbjct 300979 AATGCCCTCCTTATCTTGAATCTTCGCCTTCACGTTATCGATCGTGTCAGAAGACTCGAC 300920
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| |||| || || || || || || || |||||||| |||||
Sbjct 300919 CTCGAGCGTAATCGTCTTGCCCGTGAGGGTCTTGACGAAAATTTGCAT 300872
Score = 95.1 bits (104), Expect = 1e-14
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102
|||||| || || ||||| || || |||||| |||||| ||||||||||| ||| |
Sbjct 301567 CTCCTTCTGGATATTGTAGTCAGACAGGGTGCGACCGTCCTCGAGCTGCTTGCCCGCGAA 301508
Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162
|| | ||||||||||| ||||| || ||||| ||||| || ||| ||||| |
Sbjct 301507 AATGAGGCGCTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAATCTTCGCCTTGACATT 301448
Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222
|| | || || | ||||||| || | || | || ||||| || || || || ||
Sbjct 301447 GTCGATCGTGTCCGAAGACTCGACCTCCAGCGTGATTGTCTTACCCGTGAGGGTCTTGAC 301388
Query 131223 GAAAATCTGCAT 131234
|| ||||||||
Sbjct 301387 AAAGATCTGCAT 301376
Score = 82.4 bits (90), Expect = 7e-11
Identities = 141/202 (70%), Gaps = 2/202 (1%)
Strand=Plus/Minus
Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097
||||||||||| || || ||||| || | ||||| ||||| || ||||||||
Sbjct 301296 GTCGACTCCTTCTGGATATTGTAGTCCGAAAGAGTGCGTCCATCCTCGAGTTGCTTGCCA 301237
Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTG-CTT 131156
||| | || | ||||||||||| || ||||| || || ||||| ||| | | || |||
Sbjct 301236 GCGAAAATGAGGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTC-CTGAATCTTTGCCTT 301178
Query 131157 GAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGT 131216
| | || | || || | ||||||| |||| || | || || || || || ||
Sbjct 301177 CACGTTGTCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTCTTGCCAGTCAGGGT 301118
Query 131217 TTTTACGAAAATCTGCATGACT 131238
|| ||||| ||||||||| ||
Sbjct 301117 CTTGACGAAGATCTGCATGCCT 301096
>seq1
Length=3258266
Score = 105 bits (116), Expect = 6e-18
Identities = 142/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097
|| ||||| || ||||| ||||||||| | || ||| ||||| | |||||| ||
Sbjct 2272404 GTAGACTCTTTCTGAATATTGTAATCGGAGAGAGTTCGCCCATCCTCCAACTGCTTTCCA 2272345
Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157
||| |||| || || |||||||| ||||| || ||||| ||||| || ||| |||
Sbjct 2272344 GCGAAGATCAACCGTTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAATCTTCGCCTTC 2272285
Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217
| | || | ||| || | ||||||| |||| || | || || || || | |||
Sbjct 2272284 ACGTTGTCAATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTCTTCCCCGTCAAAGTC 2272225
Query 131218 TTTACGAAAATCTGCATG 131235
||||||||||||||||||
Sbjct 2272224 TTTACGAAAATCTGCATG 2272207
Score = 102 bits (112), Expect = 8e-17
Identities = 142/199 (71%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 131037 GGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCC 131096
||| |||||||| || || ||||||||| | |||||| ||||| ||||| || ||
Sbjct 2272123 GGTAGACTCCTTCTGGATATTGTAATCGGAAAGCGTGCGCCCATCCTCAAGCTGTTTACC 2272064
Query 131097 TGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTT 131156
||| |||| | |||||||||||| |||||||| || || ||||| || ||| |||
Sbjct 2272063 AGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGAATCTTCGCCTT 2272004
Query 131157 GAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGT 131216
|| | || | ||| || | ||||| | || | || | ||| || || || | ||
Sbjct 2272003 GACATTGTCGATAGTGTCCGAAGACTCCACTTCAAGAGTGATGGTCTTGCCCGTCAATGT 2271944
Query 131217 TTTTACGAAAATCTGCATG 131235
|| ||||| |||||||||
Sbjct 2271943 CTTGACGAAGATCTGCATG 2271925
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| ||||| | ||| || || | || | ||||||||||| || |||||||| |||
Sbjct 2272719 CCGCCGCGAAGACGGAGGACAAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAA 2272660
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || ||||| ||||||||||| || | || | ||||| || ||||| |||
Sbjct 2272659 AGGGTCCGGCCATCCTCGAGCTGCTTGCCCGCAAAAATAAGGCGCTGTTGATCCGGTGGG 2272600
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || || || ||| ||| |||| | || | || |||| |||||||
Sbjct 2272599 ATGCCCTCCTTATCCTGGATCTTCGCTTTGACATTATCGATTGTGTCGGACGACTCGACC 2272540
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | ||| || || || || ||||| || || ||||||||
Sbjct 2272539 TCCAAGGTGATGGTCTTGCCAGTCAGGGTTTTCACAAAGATCTGCAT 2272493
>seq8
Length=1872454
Score = 95.1 bits (104), Expect = 1e-14
Identities = 94/122 (77%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||||||| ||| || || | || | ||| ||||||||||| ||||| ||||||||
Sbjct 434438 CCACCGCGCAGACGAAGGACAAGGTGGAGGGTAGACTCCTTTTGGATGTTATAATCGCTG 434497
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||| || |||||||| || || | || | ||||||||||| || |||
Sbjct 434498 AGGGTGCGACCGTCTTCGAGCTGCTTTCCGGCAAAAATCAGGCGCTGCTGGTCGGGTGGG 434557
Query 131128 AT 131129
||
Sbjct 434558 AT 434559
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472012717397760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |