Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457955.1_202015-11- 03] 14 sequences; 27,988,318 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq6 125 7e-24 seq1 105 6e-18 seq8 95.1 1e-14 >seq6 Length=2247897 Score = 125 bits (138), Expect = 7e-24 Identities = 162/223 (73%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 131016 CAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCG 131075 |||||||| | | ||| | |||||||||||| || ||||| || || | |||||| Sbjct 300519 CAAACGCACCG--AGATGAAGGGTCGACTCCTTCTGGATGTTATAGTCCGAAAGGGTGCG 300462 Query 131076 CGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTC 131135 |||||| ||||||||||| ||| |||| |||||||||||||| || ||||||||||| Sbjct 300461 GCCGTCCTCGAGCTGCTTGCCCGCGAAGATCAAACGCTGCTGGTCGGGGGGGATTCCTTC 300402 Query 131136 TTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGT 131195 ||||| || ||| ||| | | || | || || | ||||| | |||| ||| Sbjct 300401 CTTGTCCTGAATCTTCGCCTTCACGTTATCGATGGTGTCCGAAGACTCCACCTCGAGGGT 300342 Query 131196 AACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 | || || || || || || || ||||| ||||||||| || Sbjct 300341 GATCGTCTTCCCAGTGAGGGTCTTCACGAAGATCTGCATGTCT 300299 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 131029 AAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGC 131088 ||||| | |||||||||||| |||||||| || || | |||||| |||||| ||| Sbjct 300795 AAATGGAGGGTCGACTCCTTCTGAATGTTATAGTCAGAAAGGGTGCGGCCGTCCTCGAGC 300736 Query 131089 TGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATT 131148 |||||||| ||| |||| || ||||||||||| || ||||| || || ||||| ||| Sbjct 300735 TGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATC 300676 Query 131149 TTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCG 131208 || ||||| | || | || || | ||||| | |||| || | || || || Sbjct 300675 TTGGCCTTGACGTTATCGATCGTGTCAGATGACTCCACCTCGAGCGTGATCGTCTTTCCA 300616 Query 131209 GTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || | || || ||||| ||||||||| || Sbjct 300615 GTCAACGTCTTCACGAAGATCTGCATGCCT 300586 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || | ||| || || | ||| | ||| |||||||| |||||||| || ||| Sbjct 301099 GCCTCCACGTAGACGAAGGACGAGATGCAAGGTGGACTCCTTCTGAATGTTATAGTCGGA 301040 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||| ||| || ||||||||||| ||| |||| || |||||||||||||| || Sbjct 301039 AAGAGTGCGGCCGTCTTCGAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCCGGGGG 300980 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || || || || ||| ||| | | || | || || | ||||||| Sbjct 300979 AATGCCCTCCTTATCTTGAATCTTCGCCTTCACGTTATCGATCGTGTCAGAAGACTCGAC 300920 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| |||| || || || || || || || |||||||| ||||| Sbjct 300919 CTCGAGCGTAATCGTCTTGCCCGTGAGGGTCTTGACGAAAATTTGCAT 300872 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102 |||||| || || ||||| || || |||||| |||||| ||||||||||| ||| | Sbjct 301567 CTCCTTCTGGATATTGTAGTCAGACAGGGTGCGACCGTCCTCGAGCTGCTTGCCCGCGAA 301508 Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162 || | ||||||||||| ||||| || ||||| ||||| || ||| ||||| | Sbjct 301507 AATGAGGCGCTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAATCTTCGCCTTGACATT 301448 Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222 || | || || | ||||||| || | || | || ||||| || || || || || Sbjct 301447 GTCGATCGTGTCCGAAGACTCGACCTCCAGCGTGATTGTCTTACCCGTGAGGGTCTTGAC 301388 Query 131223 GAAAATCTGCAT 131234 || |||||||| Sbjct 301387 AAAGATCTGCAT 301376 Score = 82.4 bits (90), Expect = 7e-11 Identities = 141/202 (70%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 ||||||||||| || || ||||| || | ||||| ||||| || |||||||| Sbjct 301296 GTCGACTCCTTCTGGATATTGTAGTCCGAAAGAGTGCGTCCATCCTCGAGTTGCTTGCCA 301237 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTG-CTT 131156 ||| | || | ||||||||||| || ||||| || || ||||| ||| | | || ||| Sbjct 301236 GCGAAAATGAGGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTC-CTGAATCTTTGCCTT 301178 Query 131157 GAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGT 131216 | | || | || || | ||||||| |||| || | || || || || || || Sbjct 301177 CACGTTGTCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTCTTGCCAGTCAGGGT 301118 Query 131217 TTTTACGAAAATCTGCATGACT 131238 || ||||| ||||||||| || Sbjct 301117 CTTGACGAAGATCTGCATGCCT 301096 >seq1 Length=3258266 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || ||||| || ||||| ||||||||| | || ||| ||||| | |||||| || Sbjct 2272404 GTAGACTCTTTCTGAATATTGTAATCGGAGAGAGTTCGCCCATCCTCCAACTGCTTTCCA 2272345 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| |||| || || |||||||| ||||| || ||||| ||||| || ||| ||| Sbjct 2272344 GCGAAGATCAACCGTTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAATCTTCGCCTTC 2272285 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | ||| || | ||||||| |||| || | || || || || | ||| Sbjct 2272284 ACGTTGTCAATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTCTTCCCCGTCAAAGTC 2272225 Query 131218 TTTACGAAAATCTGCATG 131235 |||||||||||||||||| Sbjct 2272224 TTTACGAAAATCTGCATG 2272207 Score = 102 bits (112), Expect = 8e-17 Identities = 142/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 131037 GGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCC 131096 ||| |||||||| || || ||||||||| | |||||| ||||| ||||| || || Sbjct 2272123 GGTAGACTCCTTCTGGATATTGTAATCGGAAAGCGTGCGCCCATCCTCAAGCTGTTTACC 2272064 Query 131097 TGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTT 131156 ||| |||| | |||||||||||| |||||||| || || ||||| || ||| ||| Sbjct 2272063 AGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGAATCTTCGCCTT 2272004 Query 131157 GAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGT 131216 || | || | ||| || | ||||| | || | || | ||| || || || | || Sbjct 2272003 GACATTGTCGATAGTGTCCGAAGACTCCACTTCAAGAGTGATGGTCTTGCCCGTCAATGT 2271944 Query 131217 TTTTACGAAAATCTGCATG 131235 || ||||| ||||||||| Sbjct 2271943 CTTGACGAAGATCTGCATG 2271925 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || ||||| | ||| || || | || | ||||||||||| || |||||||| ||| Sbjct 2272719 CCGCCGCGAAGACGGAGGACAAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAA 2272660 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| ||||||||||| || | || | ||||| || ||||| ||| Sbjct 2272659 AGGGTCCGGCCATCCTCGAGCTGCTTGCCCGCAAAAATAAGGCGCTGTTGATCCGGTGGG 2272600 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || ||| ||| |||| | || | || |||| ||||||| Sbjct 2272599 ATGCCCTCCTTATCCTGGATCTTCGCTTTGACATTATCGATTGTGTCGGACGACTCGACC 2272540 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || || || || ||||| || || |||||||| Sbjct 2272539 TCCAAGGTGATGGTCTTGCCAGTCAGGGTTTTCACAAAGATCTGCAT 2272493 >seq8 Length=1872454 Score = 95.1 bits (104), Expect = 1e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||||| ||| || || | || | ||| ||||||||||| ||||| |||||||| Sbjct 434438 CCACCGCGCAGACGAAGGACAAGGTGGAGGGTAGACTCCTTTTGGATGTTATAATCGCTG 434497 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||| || |||||||| || || | || | ||||||||||| || ||| Sbjct 434498 AGGGTGCGACCGTCTTCGAGCTGCTTTCCGGCAAAAATCAGGCGCTGCTGGTCGGGTGGG 434557 Query 131128 AT 131129 || Sbjct 434558 AT 434559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012717397760