Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457955.1_202015-11- 03] 14 sequences; 27,988,318 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq1 104 2e-17 >seq1 Length=3258266 Score = 104 bits (114), Expect = 2e-17 Identities = 94/116 (81%), Gaps = 2/116 (2%) Strand=Plus/Minus Query 33920 CCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGT-CGCTCGTCGTCC 33978 ||||||| || |||||||| ||||||||||||||||| | || ||| || |||| ||| Sbjct 2272928 CCAGATGGAGGGTGCTCTCTTTCTGAATGTTGTAATCCGA-AAGTGTGCGACCGTCCTCC 2272870 Query 33979 AATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCTTTGTC 34034 ||||||||||| ||||| |||||||| ||||| ||| ||| | || || ||||| Sbjct 2272869 AATTGCTTGCCCGCAAAAATCAGGCGTTGCTGGTCCGGCGGGATGCCTTCCTTGTC 2272814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397062332251228