Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457955.1_202015-11- 03] 14 sequences; 27,988,318 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq3 138 1e-27 >seq3 Length=3164952 Score = 138 bits (152), Expect = 1e-27 Identities = 340/506 (67%), Gaps = 15/506 (3%) Strand=Plus/Plus Query 126065 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTC 126124 ||||||||||| |||||||||||| |||||| ||||| |||||||| || |||||| Sbjct 1890177 CCCTCGTCACGACTGATGAGTTCATTGGAGAAGGTGAGTCCAGGCATGAGGCCACGCTTC 1890236 Query 126125 TTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAAC 126184 ||||||||||| || | || ||||| |||||||| || ||||||||| ||||| Sbjct 1890237 TTCAACCAGAAGATTGAGGCGAAAGAACCGGAGAAGAAAATGCCCTCCACAGCGGCGAAG 1890296 Query 126185 GCAAAGAGACGCTCAGCAAA---GGAGCG-CGACTTTGTGTCAAACCACTTCATCGCCCA 126240 || | | ||||||||||| |||||| ||| | | | | ||| | ||||| Sbjct 1890297 GCGACTAATCGCTCAGCAAATGTGGAGCGACGA-TCGGAG---ATCCAGCGTAGTGCCCA 1890352 Query 126241 CTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCT-TCTTTT 126299 | |||||| | | || ||| || | ||||| | || || || || | || | || Sbjct 1890353 GTCCGCCTTCCTTTTGACACAGGGAATGGTCTCAACAGCATCGAAAAGGTACTCGCGTTG 1890412 Query 126300 CTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCATTT 126359 || | || || |||||||| |||| || || || || || |||| ||||| ||| Sbjct 1890413 CTTA-GGGTCCTTGATGTAAGTATCGATAAGAAGGGAGTAGGTCTCGCTGTGGATATTTT 1890471 Query 126360 -CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCGGCA 126418 ||| || || || ||||||| | ||||| || ||| ||||| | | Sbjct 1890472 CCATCAT-AATTTGGAACCCGTAGAAGCAACGCGCCTCAGCCGCCTGAACCTCGTTCGAG 1890530 Query 126419 AAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGATA 126478 || | | | ||||| || || ||||| || | ||||||||||| |||| | Sbjct 1890531 AAGCGCTCAACAAGGTTCTCGTTGACGATGCCATCAGAGGCGGCAAAAAACGCGAGGACA 1890590 Query 126479 TACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAGATCCTTC 126535 | | | || | | ||||| ||||| | || | |||||||||| ||||| || Sbjct 1890591 TGCGAGACAAAGTGACGCTCATTGTCGTTAAGGCGGTTATTCCAGTCGTGGAGATCTTTT 1890650 Query 126536 GAGAGATCTACCTCCTCCGCAGTCCA 126561 || || || | ||| || |||||||| Sbjct 1890651 GACAGGTCCATCTCTTCGGCAGTCCA 1890676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353495463120