Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457955.1_202015-11-
03] 14 sequences; 27,988,318 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq1 102 8e-17
seq8 96.9 3e-15
seq6 91.5 1e-13
>seq1
Length=3258266
Score = 102 bits (112), Expect = 8e-17
Identities = 146/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 64238 AGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGC 64297
|| |||| || || || || || || |||||||| | | |||||| | || ||||||
Sbjct 2272131 AGGTGAAGGGTAGACTCCTTCTGGATATTGTAATCGGAAAGCGTGCGCCCATCCTCAAGC 2272072
Query 64298 TGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATT 64357
|| || || || | || || ||||||||||||||||| || || || || || || ||
Sbjct 2272071 TGTTTACCAGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGAATC 2272012
Query 64358 TTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCG 64417
|| ||| ||| || | || || | |||||||| | ||| | |||||||||
Sbjct 2272011 TTCGCCTTGACATTGTCGATAGTGTCCGAAGACTCCACTTCAAGAGTGATGGTCTTGCCC 2271952
Query 64418 GTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| || || ||||| || |||||
Sbjct 2271951 GTCAATGTCTTGACGAAGATCTGCAT 2271926
Score = 98.7 bits (108), Expect = 1e-15
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || ||||| ||||| |||||||| | || || ||| | || || | |||||| ||
Sbjct 2272404 GTAGACTCTTTCTGAATATTGTAATCGGAGAGAGTTCGCCCATCCTCCAACTGCTTTCCA 2272345
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| | || | ||| ||||||||||||||||| ||||| || || || || || |||
Sbjct 2272344 GCGAAGATCAACCGTTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAATCTTCGCCTTC 2272285
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| || | || || | || || || | ||| | ||||| || ||||||||
Sbjct 2272284 ACGTTGTCAATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTCTTCCCCGTCAAAGTC 2272225
Query 64427 TTTACGAAAATTTGCAT 64443
||||||||||| |||||
Sbjct 2272224 TTTACGAAAATCTGCAT 2272208
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||||||||| | | || || || |||| |||||| || || || |||||||| || |
Sbjct 2272720 ACCGCCGCGAAGACGGAGGACAAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGA 2272661
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||| || | || || ||||||||||| ||| |||| || ||||| || || || ||
Sbjct 2272660 AAGGGTCCGGCCATCCTCGAGCTGCTTGCCCGCAAAAATAAGGCGCTGTTGATCCGGTGG 2272601
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394
|| || || || || || | | || ||||| ||| || | ||| || | || |
Sbjct 2272600 GATGCCCTCCTTATCCTGGA-TCTTCGCTTTGACATTATCGATTGTGTCGGACGACTCGA 2272542
Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
| || | || | ||||||||| |||| ||||| || || || |||||
Sbjct 2272541 CCTCCAAGGTGATGGTCTTGCCAGTCAGGGTTTTCACAAAGATCTGCAT 2272493
Score = 84.2 bits (92), Expect = 2e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312
||||| |||||||||||||| | | ||||| |||| || | |||||||| ||| ||
Sbjct 2272911 TCTTTCTGAATGTTGTAATCCGAAAGTGTGCGACCGTCCTCCAATTGCTTGCCCGCAAAA 2272852
Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372
|| || || |||||||| || || || ||||| || ||||| || || ||| |||
Sbjct 2272851 ATCAGGCGTTGCTGGTCCGGCGGGATGCCTTCCTTGTCTTGAATCTTCGCCTTCACATTA 2272792
Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432
|| | || || | || || || | || | |||||||| || | || || |||
Sbjct 2272791 TCGATCGTGTCCGAAGACTCTACCTCCAACGTGATTGTCTTGCCTGTGAGGGTCTTGACG 2272732
Query 64433 AAAATTTGCAT 64443
|| || |||||
Sbjct 2272731 AAGATCTGCAT 2272721
>seq8
Length=1872454
Score = 96.9 bits (106), Expect = 3e-15
Identities = 95/123 (77%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| ||||||| | ||| || || || | || || || ||||| ||||| |||||
Sbjct 434437 ACCACCGCGCAGACGAAGGACAAGGTGGAGGGTAGACTCCTTTTGGATGTTATAATCGCT 434496
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| |||||| ||||||| |||||||| |||||| |||| || |||||||||||||| ||
Sbjct 434497 GAGGGTGCGACCGTCTTCGAGCTGCTTTCCGGCAAAAATCAGGCGCTGCTGGTCGGGTGG 434556
Query 64336 AAT 64338
||
Sbjct 434557 GAT 434559
>seq6
Length=2247897
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || ||||| | || || || || |||||||| || || | | ||||| ||||
Sbjct 301084 AAGGACGAGATGCAAGGTGGACTCCTTCTGAATGTTATAGTCGGAAAGAGTGCGGCCGTC 301025
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
||| ||||||||||| || | || | ||||||||||| || ||||| || || || ||
Sbjct 301024 TTCGAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCCGGGGGAATGCCCTCCTTATC 300965
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
||| || || ||| || || | || ||| | || || || | || | ||
Sbjct 300964 TTGAATCTTCGCCTTCACGTTATCGATCGTGTCAGAAGACTCGACCTCGAGCGTAATCGT 300905
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||||| || | || || ||||||||||||||
Sbjct 300904 CTTGCCCGTGAGGGTCTTGACGAAAATTTGCAT 300872
Score = 89.7 bits (98), Expect = 5e-13
Identities = 84/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312
|| || || || ||||| || | | |||||| |||| || ||||||||||| || ||
Sbjct 301566 TCCTTCTGGATATTGTAGTCAGACAGGGTGCGACCGTCCTCGAGCTGCTTGCCCGCGAAA 301507
Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTT 64359
||||| |||||||||||||||||||| ||||| || || || || ||
Sbjct 301506 ATGAGGCGCTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAATCTT 301460
Score = 86.0 bits (94), Expect = 6e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 64238 AGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGC 64297
||||||| ||||| || || || ||||| || || | | |||||| |||| || |||
Sbjct 300508 AGATGAAGGGTCGACTCCTTCTGGATGTTATAGTCCGAAAGGGTGCGGCCGTCCTCGAGC 300449
Query 64298 TGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATT 64357
|||||||| || | || | |||||||||||||| || |||||||| || || || ||
Sbjct 300448 TGCTTGCCCGCGAAGATCAAACGCTGCTGGTCGGGGGGGATTCCTTCCTTGTCCTGAATC 300389
Query 64358 TTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCG 64417
|| ||| || || | || || | ||||| || | || | ||||| ||
Sbjct 300388 TTCGCCTTCACGTTATCGATGGTGTCCGAAGACTCCACCTCGAGGGTGATCGTCTTCCCA 300329
Query 64418 GTCAAAGTTTTTACGAAAATTTGCATTTTAATAAT 64452
|| | || || ||||| || ||||| | |||||
Sbjct 300328 GTGAGGGTCTTCACGAAGATCTGCATGTCTATAAT 300294
Score = 84.2 bits (92), Expect = 2e-11
Identities = 142/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 64238 AGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGC 64297
||||||| ||||| || || || || ||||| || | | ||||| | || || ||
Sbjct 301305 AGATGAAGAGTCGACTCCTTCTGGATATTGTAGTCCGAAAGAGTGCGTCCATCCTCGAGT 301246
Query 64298 TGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATT 64357
|||||||| || ||||||| ||||||||||| || || || || || || || || ||
Sbjct 301245 TGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGAATC 301186
Query 64358 TTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCG 64417
||| ||| || || | || ||| | || || || | || | ||||||||
Sbjct 301185 TTTGCCTTCACGTTGTCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTCTTGCCA 301126
Query 64418 GTCAAAGTTTTTACGAAAATTTGCAT 64443
|||| || || ||||| || |||||
Sbjct 301125 GTCAGGGTCTTGACGAAGATCTGCAT 301100
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499644712562160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |