Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457955.1_202015-11- 03] 14 sequences; 27,988,318 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq5 91.5 2e-13 seq3 87.8 2e-12 >seq5 Length=2330625 Score = 91.5 bits (100), Expect = 2e-13 Identities = 180/264 (68%), Gaps = 2/264 (1%) Strand=Plus/Minus Query 110863 GCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC 110922 || || |||| |||||||| | ||||| ||||| ||| ||| || || ||||| Sbjct 511845 GCCCGGATGTTGTGGATATTGAGTCCAATGCCACCAGCCGTCTTGCTGATCATGGCACAG 511786 Query 110923 TCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAA 110982 | |||| || |||| || || ||||| || || | || || || || || || Sbjct 511785 TTCTTGAGAGTTTCATAGATTCCCTCAATGGAGTCATCTTTCATGCAAACCAGGAAACAC 511726 Query 110983 GAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAAC 111042 || || |||||| || || ||||| ||||||||||| |||| || ||| |||| Sbjct 511725 GAGCTCAATTGAGGATTGGGTGTACCCGCGTTGAAGAGTGTTGGTGAGGCGTGAGTGAAG 511666 Query 111043 AGACCTTGGGACATCTTGTTGTATGTGTCGAGTGCG-GAGGGTACATCTTTACCGTGAAT 111101 || || ||||||| |||||| || || | ||| || | ||||| |||||||| Sbjct 511665 TAACGTTCGGACATCAGGTTGTAGGTTTCAATAGCGCGATCG-ACATCAGCGCCGTGAAT 511607 Query 111102 ACCAATGGCAACTCGCATGAACAT 111125 || | || || ||||||| ||| Sbjct 511606 GCCGACAGCTACGCGCATGATCAT 511583 Score = 91.5 bits (100), Expect = 2e-13 Identities = 180/264 (68%), Gaps = 2/264 (1%) Strand=Plus/Minus Query 110863 GCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC 110922 || || |||| |||||||| | ||||| ||||| ||| ||| || || ||||| Sbjct 512442 GCCCGGATGTTGTGGATATTGAGTCCAATGCCACCAGCCGTCTTGCTGATCATGGCACAG 512383 Query 110923 TCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAA 110982 | |||| || |||| || || ||||| || || | || || || || || || Sbjct 512382 TTCTTGAGAGTTTCATAGATTCCCTCAATGGAGTCATCTTTCATGCAAACCAGGAAACAC 512323 Query 110983 GAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAAC 111042 || || |||||| || || ||||| ||||||||||| |||| || ||| |||| Sbjct 512322 GAGCTCAATTGAGGATTGGGTGTACCCGCGTTGAAGAGTGTTGGTGAGGCGTGAGTGAAG 512263 Query 111043 AGACCTTGGGACATCTTGTTGTATGTGTCGAGTGCG-GAGGGTACATCTTTACCGTGAAT 111101 || || ||||||| |||||| || || | ||| || | ||||| |||||||| Sbjct 512262 TAACGTTCGGACATCAGGTTGTAGGTTTCAATAGCGCGATCG-ACATCAGCGCCGTGAAT 512204 Query 111102 ACCAATGGCAACTCGCATGAACAT 111125 || | || || ||||||| ||| Sbjct 512203 GCCGACAGCTACGCGCATGATCAT 512180 >seq3 Length=3164952 Score = 87.8 bits (96), Expect = 2e-12 Identities = 106/143 (74%), Gaps = 6/143 (4%) Strand=Plus/Plus Query 119514 CCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTC 119573 || || || ||| |||||| ||||| |||| |||||||||||||| || | ||| Sbjct 1890177 CCCTCGTCACGACTGATGAGTTCATTGGAGAAGGTGAGTCCAGGCATGAGGCCACGCTTC 1890236 Query 119574 TTTAGCCAAAAGAT---GGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCG 119630 || | ||| ||||| ||| || || || || ||||| |||||||||||| |||| Sbjct 1890237 TTCAACCAGAAGATTGAGGCGAAAGAA---CCGGAGAAGAAAATGCCCTCCACAGCGGCG 1890293 Query 119631 AAAGCGAATAGACGCTCAGCAAA 119653 || |||| || ||||||||||| Sbjct 1890294 AAGGCGACTAATCGCTCAGCAAA 1890316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975896929200