Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457955.1_202015-11-
03] 14 sequences; 27,988,318 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq3 138 1e-27
>seq3
Length=3164952
Score = 138 bits (152), Expect = 1e-27
Identities = 309/464 (67%), Gaps = 0/464 (0%)
Strand=Plus/Minus
Query 37167 AACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAA 37226
||||| | ||| |||||||| ||| | ||||| || | ||| |||| ||| ||||||
Sbjct 1892487 AACAAGAGACAGGCAAAATCTGTATGCATCCCTTCGTCCCGACTAATCAGTTCGTTAGAA 1892428
Query 37227 AAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCA 37286
|||||||| || ||||| | ||||| ||| || | ||| || |||| |||||||||||
Sbjct 1892427 AAGGTTAAACCAGGCATGAGACCTCGTTTCTTCAGCCAGAAGATTGAAGCAAAAGATCCG 1892368
Query 37287 GAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTA 37346
|| ||||| || ||||| || || || || || || | | || | || || || |
Sbjct 1892367 GAGAAGAAGATCCCTTCTACCGCCGCGAACGCCACCAACCTCGTGGCAAACGTCGACCGT 1892308
Query 37347 TAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCA 37406
| ||||| ||||| | | ||| || | ||| || || ||| || || ||
Sbjct 1892307 TGGTCAGAGATCCACCTGAGGGCCCACTCGGTCTTCTGCTTGACGCATGGTATAGTCTCG 1892248
Query 37407 ATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAA 37466
|| | || ||||| | | | | | || | || || ||||| || || | |
Sbjct 1892247 ATCGAATTGAAGAGGAGGCCACGCTGCTGAGAGTCAGAGATGTAGGTATCGATGAGGAGA 1892188
Query 37467 CTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCT 37526
|| |||| |||||||| ||||| || || ||||| ||||||||||| | ||
Sbjct 1892187 GAGTATGTTTCCGAGTGAATGTTTTCCATCATGATTTGAAATCCATAAAAACAGCGGACT 1892128
Query 37527 TCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCA 37586
|||| ||| || ||| | |||||| || | | || || || || || || ||
Sbjct 1892127 TCAGCGGCTTGTACTTCGCTCGAAAACCGCTCCACCAGATTCTCGTTGACAATACCGTCG 1892068
Query 37587 CTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTC 37630
||| ||||| || || || |||||| ||| ||||| | |||
Sbjct 1892067 GAAGCGGCAAAAAATGCCAGGACATATGATATGAAATGGCGTTC 1892024
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592316696344560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |