Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457955.1_202015-11- 03] 14 sequences; 27,988,318 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 7e-13 >seq1 Length=3258266 Score = 89.7 bits (98), Expect = 7e-13 Identities = 129/180 (72%), Gaps = 4/180 (2%) Strand=Plus/Minus Query 197027 CCTCGTCGCTAAAGCCCGTACCGATCTTACAAATGGATTCGTACATCTGGTTGTCGGGAT 197086 |||| ||||| || ||||| |||||||| || || | | | | |||| | ||||| | Sbjct 1701922 CCTCCTCGCTGAACCCCGTGCCGATCTTGCAGATCGTCTGGAATATCTCGCCGTCGGCGT 1701863 Query 197087 TGTAACAGGCGAGTAAGAAAGCGCCGTAG--GTTCCCGTTCTCTTTCCCACCCCGTTGAA 197144 ||| |||||||| ||||| ||||||||| |||| || | ||| ||| |||| | | Sbjct 1701862 CGTAGCAGGCGAGCAAGAACGCGCCGTAGACGTTC--GTGCGCTTGCCCTTTCCGTAGTA 1701805 Query 197145 GCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTCTTCAG 197204 ||| |||| || | || || || | ||||| | ||| | | ||| ||||||||||| Sbjct 1701804 GCCCCCGACGACAGCTAGGTCGAGCGAGTCGCCGAGCCCCGCGAGGTAGTCTTTCTTCAG 1701745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676729481572320