Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457955.1_202015-11- 03] 14 sequences; 27,988,318 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq1 221 2e-52 seq2 165 1e-35 seq6 159 5e-34 seq8 113 6e-20 seq7 107 3e-18 >seq1 Length=3258266 Score = 221 bits (244), Expect = 2e-52 Identities = 187/230 (81%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| ||||||||||||||||| ||||| || || |||||| | ||||| ||||||| Sbjct 2272491 GTATGCAGATCTTTGTGAAAACCCTGACTGGCAAGACCATCACCTTGGAGGTCGAGTCGT 2272550 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | |||||||||||||| ||||||| ||||| || |||||||| ||||| ||||| |||| Sbjct 2272551 CCGACACAATCGATAATGTCAAAGCGAAGATCCAGGATAAGGAGGGCATCCCACCGGATC 2272610 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 | || || ||||||||||| || || ||||| || ||||| || ||||| | || |||| Sbjct 2272611 AACAGCGCCTTATTTTTGCGGGCAAGCAGCTCGAGGATGGCCGGACCCTTTCCGACTACA 2272670 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 || | || |||||||| || || |||||||| || | ||||| || ||| Sbjct 2272671 ACATCCAGAAGGAGTCGACGCTTCACCTTGTCCTCCGTCTTCGCGGCGGT 2272720 Score = 163 bits (180), Expect = 4e-35 Identities = 161/208 (77%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| || || || | || || || || ||||| || || || ||||| || Sbjct 2271926 ATGCAGATCTTCGTCAAGACATTGACGGGCAAGACCATCACTCTTGAAGTGGAGTCTTCG 2271985 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || |||| || |||||||| || ||||| || || || ||||| ||| Sbjct 2271986 GACACTATCGACAATGTCAAGGCGAAGATTCAGGACAAGGAGGGTATCCCTCCCGACCAG 2272045 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || ||||| || ||||||||||||||||| ||||| || || || | |||||||| Sbjct 2272046 CAGCGTCTTATCTTCGCTGGTAAACAGCTTGAGGATGGGCGCACGCTTTCCGATTACAAT 2272105 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTG 172069 | || ||||||||||| || ||||||| Sbjct 2272106 ATCCAGAAGGAGTCTACCCTTCACCTTG 2272133 Score = 147 bits (162), Expect = 3e-30 Identities = 149/194 (77%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| ||||| || || ||||| || || || || ||||| | ||||| ||||| | Sbjct 2272719 GTATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACAATCACGTTGGAGGTAGAGTCTT 2272778 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | ||||| |||||||| | || || ||||||||||| ||||||||||| || || || | Sbjct 2272779 CGGACACGATCGATAATGTGAAGGCGAAGATTCAAGACAAGGAAGGCATCCCGCCGGACC 2272838 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 ||||||| || |||||||| || || || | || || || || || || | ||||||| Sbjct 2272839 AGCAACGCCTGATTTTTGCGGGCAAGCAATTGGAGGACGGTCGCACACTTTCGGATTACA 2272898 Query 172040 ACGTTCAAAAGGAG 172053 || |||| || ||| Sbjct 2272899 ACATTCAGAAAGAG 2272912 Score = 134 bits (148), Expect = 2e-26 Identities = 334/500 (67%), Gaps = 9/500 (2%) Strand=Plus/Minus Query 198450 TTCAAGGATGTTGAGGGTATCGACTCAGCTAAGGATGAGCTCGAGGAGATTGTTGATTTT 198509 |||||||| || | || || ||| || ||||| ||| || |||| |||| | || Sbjct 2090083 TTCAAGGACGTCGCAGGCATGGACGAGGCCAAGGAGGAGATCATGGAGTTTGTCAAATTC 2090024 Query 198510 CTTAAAAACCCCGAAAAGTACTATGGAAG-TGGTGCCCGA-ATCCCACGTGGTGCTCTTC 198567 || || ||||| |||||| | ||| ||| | | | ||||| || ||||| | | Sbjct 2090023 CTCAAGGACCCCACCAAGTACGAA--AAGCTGGGGGCTAAGATCCCTCGCGGTGCCATCC 2089966 Query 198568 TCGCCGGTGCCCCGGGTACTGGTAAAACCCTTCTAGCTCGTGCTATCGCGGGTGAATCGA 198627 || |||| | || ||||| || || || | || ||| || | ||| || ||| ||| Sbjct 2089965 TCTCCGGACCTCCTGGTACAGGAAAGACGTTACTTGCTAAGGCCACCGCCGGCGAAGCGA 2089906 Query 198628 GTGTCCCCTTTCT-TCAGTGCTCCGCGGCGAGTTTCATCGAGATGTTCGTTGGTGTTGGT 198686 | ||||| || || || || ||||| | ||| ||||||||||||| ||||||||| Sbjct 2089905 GCGTCCCTTTCCTCTCCGT-CTCCGGTTCCGAATTCGTCGAGATGTTCGTCGGTGTTGGT 2089847 Query 198687 GCTAAGCGCGTCCGGGAACTCTTTGAGCAAGCACGTGAAAATCAACCATGTATCATCTTC 198746 | ||| || || || || || | | || ||||| || || ||||||||| Sbjct 2089846 TCCTCGCGTGTACGCGACCTTTTCGCGTCCGCGAAGAAAAATGCCCCTTGCATCATCTTC 2089787 Query 198747 ATTGATGAGATTGACGCTGTTGGTAAGAAGCGTGG---TGGAACTACTACACCTGGTAAT 198803 || || || |||||||| | |||||| || || ||| | | ||| || Sbjct 2089786 ATCGACGAAATTGACGCCATCGGTAAGTCACGCGGAAAGGGAGGCAACATGGGTGGGAAC 2089727 Query 198804 GATGAGCGTGAGCAGACGATTAACCAGCTTCTCACTGAGATGGATGGTTTTGACAATGAG 198863 || ||||| ||| |||| | |||||||| || |||||||||||||||| || || Sbjct 2089726 GACGAGCGCGAGTCGACGCTCAACCAGCTCCTTGTCGAGATGGATGGTTTTGGCACGCAG 2089667 Query 198864 ACTGGTATCGTGGTGATTGCTGCTACAAATAGGATTGATATCCTAGATGATGCACTGCTT 198923 | |||| || | || | || |||||| |||| |||| || ||||| | Sbjct 2089666 CAGCATGTCGTCGTACTGGCCGGCACCAATAGGCCTGATGTCCTCGACCCCGCACTCATG 2089607 Query 198924 CGTCCCGGTCGATTCGACCG 198943 |||||||| || |||||||| Sbjct 2089606 CGTCCCGGCCGGTTCGACCG 2089587 Score = 98.7 bits (108), Expect = 1e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || || || ||||| || || || || |||||||| ||||| ||||| || Sbjct 638568 ATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTCT 638509 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 ||||| ||||| ||| ||||||||||||| || || |||||||| Sbjct 638508 GACACCATCGACAACGTCAAAGCCAAGATCCAGGACAAGGAAGG 638465 Score = 93.3 bits (102), Expect = 6e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| || || || || || || || |||||||| || ||||||||||| || Sbjct 2271646 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACTATCACGCTTGAGGTTGAGTCTTCC 2271705 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 || || ||||| || |||| ||||||||||| |||||||| || Sbjct 2271706 GATACCATCGACAATGTCAAGGCCAAGATTCAGGATAAGGAGGG 2271749 >seq2 Length=2985891 Score = 165 bits (182), Expect = 1e-35 Identities = 250/356 (70%), Gaps = 0/356 (0%) Strand=Plus/Plus Query 195632 CCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATG 195691 || ||||| || || || ||||| | | |||||||||||||| || || |||| | | Sbjct 1604370 CCGGAAGAGATCTCCTCGATGGTTCTCTTGAAGATGAAGGAGACCGCTGAGTCTTACCTC 1604429 Query 195692 GGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGA 195751 || | || || | | || || ||||| || ||||| ||||||| || || || || Sbjct 1604430 GGCACGACCGTCACGAACGCCGTCGTGACGGTCCCTGCGTACTTCAACGACTCGCAGCGT 1604489 Query 195752 CAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAA 195811 ||||| || |||||||| | | || | || | ||| ||| | || ||||| || Sbjct 1604490 CAGGCTACCAAGGACGCCGGAACCATCTCCGGAATGAACATCCTTCGTATCATCAACGAG 1604549 Query 195812 CCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTA 195871 || || || || || ||||| || ||||| |||||||| | || || || || Sbjct 1604550 CCCACCGCTGCCGCTATTGCGTACGGTCTCGACAAGAAGGTGATCGGCGAGCGCAACGTC 1604609 Query 195872 TTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGT 195931 | ||||| |||||||| || || || || ||||| || ||||| | || || | ||| Sbjct 1604610 CTCATCTTCGATCTCGGAGGAGGAACTTTCGATGTGTCTCTTCTTACCATCGAGGAGGGT 1604669 Query 195932 ATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 || ||||| || ||||| ||||| ||||| || || | |||||||| |||||||| Sbjct 1604670 ATCTTCGAGGTCAAGGCCACTGCCGGTGACACCCACTTGGGTGGTGAGGATTTCGA 1604725 Score = 107 bits (118), Expect = 3e-18 Identities = 113/149 (76%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 195332 TGTGTTGGTGTATGGCAAAATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGT 195391 || || ||||| ||||| || || ||||| ||||| ||| |||| || || || ||||| Sbjct 1603959 TGCGTGGGTGTGTGGCAGAACGACCGTGTCGAGATCATCGCGAACGATCAGGGTAACCGC 1604018 Query 195392 ACAACTCCATCGTACGTTGCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAA 195451 || ||||| ||||| || |||| | || || || |||||| | || ||||||||||| Sbjct 1604019 ACGACTCCCTCGTATGTCTCCTTCTCCGACAACGAGCGTCTCATCGGTGATGCCGCAAAG 1604078 Query 195452 AATCAGACAGCTATGAACCCTATCAATAC 195480 || ||| || |||||||| ||||| || Sbjct 1604079 AACCAGGTCGCGATGAACCCCATCAACAC 1604107 Score = 104 bits (114), Expect = 3e-17 Identities = 187/271 (69%), Gaps = 8/271 (3%) Strand=Plus/Minus Query 195721 TGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGC 195780 ||| ||||| ||||||| || || || || | ||||| |||||||| | || || || Sbjct 854663 TGTCCCTGCCTACTTCAACGACTCGCAGCGTCTCGCGACCAAGGACGCCGGCGCCATCGC 854604 Query 195781 GGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCT 195840 || || || || | || ||||| || || || || || || || || || ||||| Sbjct 854603 TGGCCTCGACGTGCTCCGTATCATCAACGAGCCCACCGCCGCCGCCATCGCATACGGTCT 854544 Query 195841 GGACAAGAACAAGGACGAAGATAAA----AATGTATTGATCTTTGATCTCGGTGGTGGTA 195896 ||| || ||| |||||| | || || | ||||| ||||||||||| || | Sbjct 854543 CGACCAG--CAAT--CGAAGACCGAGCGCAACGTCCTCATCTTCGATCTCGGTGGAGGAA 854488 Query 195897 CGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTG 195956 | || |||||||| || ||||| || || ||| | |||| || ||||| || || | Sbjct 854487 CTTTCGATGTCTCGCTCCTCAACATCAGCGGCGGTGTCTTCGCCGTCAAGGCCACCGCCG 854428 Query 195957 GTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 | || || || | |||||||| || ||||| Sbjct 854427 GCGACACCCACTTGGGTGGTGAGGACTTCGA 854397 >seq6 Length=2247897 Score = 159 bits (176), Expect = 5e-34 Identities = 159/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| ||||| ||||| || || |||||||||||||| ||||| || Sbjct 300303 ATGCAGATCTTCGTGAAGACCCTCACTGGGAAGACGATCACCCTCGAGGTGGAGTCTTCG 300362 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||||||| | || || |||||||| || |||||||| || || ||||| ||| Sbjct 300363 GACACCATCGATAACGTGAAGGCGAAGATTCAGGACAAGGAAGGAATCCCCCCCGACCAG 300422 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || | || || || || || ||||| || || || || ||||| | || || ||| Sbjct 300423 CAGCGTTTGATCTTCGCGGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTATAAC 300482 Query 172042 GTTCAAAAGGAGTCTACTCTACACCT 172067 | || |||||||| || || || || Sbjct 300483 ATCCAGAAGGAGTCGACCCTTCATCT 300508 Score = 158 bits (174), Expect = 2e-33 Identities = 156/202 (77%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || |||||||||| || || || ||||| || || || || || || |||||||| |||| Sbjct 300867 GTGGTATGCAAATTTTCGTCAAGACCCTCACGGGCAAGACGATTACGCTCGAGGTCGAGT 300926 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || ||||| ||||||||| | || || ||||||||||||||||| |||||||| || | Sbjct 300927 CTTCTGACACGATCGATAACGTGAAGGCGAAGATTCAAGATAAGGAGGGCATTCCCCCGG 300986 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || | || || || || || ||||| ||||| || || || || | || | Sbjct 300987 ACCAGCAGCGCTTGATCTTCGCGGGCAAGCAGCTCGAAGACGGCCGCACTCTTTCCGACT 301046 Query 172037 ACAACGTTCAAAAGGAGTCTAC 172058 | ||| |||| |||||||| || Sbjct 301047 ATAACATTCAGAAGGAGTCCAC 301068 >seq8 Length=1872454 Score = 113 bits (124), Expect = 6e-20 Identities = 101/127 (80%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 171965 GCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTA 172024 |||| |||||||| ||||| || || |||||||| || || ||||| ||||| || || | Sbjct 434561 GCATCCCACCCGACCAGCAGCGCCTGATTTTTGCCGGAAAGCAGCTCGAAGACGGTCGCA 434502 Query 172025 CCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGG 172084 ||||| ||||| ||| | |||||||||||||| || |||||||| || | || || | Sbjct 434501 CCCTCAGCGATTATAACATCCAAAAGGAGTCTACCCTCCACCTTGTCCTTCGTCTGCGCG 434442 Query 172085 GTGGTGC 172091 ||||||| Sbjct 434441 GTGGTGC 434435 >seq7 Length=1601081 Score = 107 bits (118), Expect = 3e-18 Identities = 181/257 (70%), Gaps = 5/257 (2%) Strand=Plus/Plus Query 195732 ACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACT 195791 |||||| || | || || |||||||| ||||| || | | || || ||||| | || Sbjct 1080572 ACTTCAACGACGCCCAGCGTCAGGCGACTAAGGATGCCGGCACCATCGCTGGTCTCA-CT 1080630 Query 195792 GTC-TTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAAC 195850 ||| || | || ||||| || || || || ||||| || || || || || |||||||| Sbjct 1080631 GTCCTTCGTATCATCAACGAGCCCACTGCCGCTGCGATCGCCTACGGCCTTGACAAGAAA 1080690 Query 195851 AAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCA 195910 | ||| | | | || | ||| |||||||||||||| || || |||||||| Sbjct 1080691 GGCGGCGAGTCTCAGATC--ATCG-TCTACGATCTCGGTGGTGGAACTTTCGATGTCTCC 1080747 Query 195911 CTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTA 195970 || ||| ||| || | || | ||||| ||| ||| || || ||||| || ||||| Sbjct 1080748 CTCCTCTCTATCGACGAGGGCGTCTTCGAGGTATTGGCCACGGCCGGTGACACCCATCTC 1080807 Query 195971 GGTGGTGAAGATTTCGA 195987 |||||||| || ||||| Sbjct 1080808 GGTGGTGAGGACTTCGA 1080824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657862284874080