Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457955.1_202015-11- 03] 14 sequences; 27,988,318 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq6 127 2e-24 seq1 125 7e-24 >seq6 Length=2247897 Score = 127 bits (140), Expect = 2e-24 Identities = 149/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 |||| ||| ||||| |||||||| || || ||| ||| ||||||||||||||||| Sbjct 301573 GGTGCTCTCCTTCTGGATATTGTAGTCAGACAGGGTGCGACC-GTCCTCGAGCTGCTTGC 301515 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 ||||| ||||||| ||||||||||||||||| || ||||||||||| ||||| || Sbjct 301514 CCGCGAAAATGAGGCGCTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAATCTTCGCCT 301455 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | |||||| | | ||| || || | |||| || || || || || | Sbjct 301454 TGACATTGTCGATCGTGTCCGAAGACTCGACCTCCAGCGTGATTGTCTTACCCGTGAGGG 301395 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || |||||||| Sbjct 301394 TCTTGACAAAGATCTGCAT 301376 Score = 123 bits (136), Expect = 2e-23 Identities = 150/202 (74%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| |||||||| || | ||| | | | |||||||| |||||||| Sbjct 301296 GTCGACTCCTTCTGGATATTGTAGTCCGAAAGAGTGCGTCCA-TCCTCGAGTTGCTTGCC 301238 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| ||||||| ||||||||||| || ||||| || |||||||| |||||| ||| Sbjct 301237 AGCGAAAATGAGGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGAATCTTTGCCTT 301178 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | |||||| | | ||| || |||| |||| || ||||| ||||| || Sbjct 301177 CACGTTGTCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTCTTGCCAGTCAGGGT 301118 Query 133643 TTTTACGAAAATCTGCATGGCT 133664 || ||||| ||||||||| || Sbjct 301117 CTTGACGAAGATCTGCATGCCT 301096 Score = 122 bits (134), Expect = 8e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | ||| ||||| ||||| || || || || | ||| |||||||||| Sbjct 300795 AAATGGAGGGTCGACTCCTTCTGAATGTTATAGTCAGAAAGGGTGCGGCCGTCCTCGAGC 300736 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 |||||||||||| | || | ||||||||||| || |||||||| |||||||| |||| Sbjct 300735 TGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATC 300676 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||||| | || | |||||| | | |||||| |||| |||| || || || Sbjct 300675 TTGGCCTTGACGTTATCGATCGTGTCAGATGACTCCACCTCGAGCGTGATCGTCTTTCCA 300616 Query 133635 GTCAGAGTTTTTACGAAAATCTGCATGGCT 133664 |||| || || ||||| ||||||||| || Sbjct 300615 GTCAACGTCTTCACGAAGATCTGCATGCCT 300586 Score = 114 bits (126), Expect = 1e-20 Identities = 150/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | ||| ||||| ||||| || || || || | ||| |||||||||||| Sbjct 300506 ATGAAGGGTCGACTCCTTCTGGATGTTATAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTG 300447 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 |||||||||| | || | |||||||||||||| ||||| ||||||||||| ||||| Sbjct 300446 CTTGCCCGCGAAGATCAAACGCTGCTGGTCGGGGGGGATTCCTTCCTTGTCCTGAATCTT 300387 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||| | | || | ||||| | | |||||| |||| ||||| || || || || Sbjct 300386 CGCCTTCACGTTATCGATGGTGTCCGAAGACTCCACCTCGAGGGTGATCGTCTTCCCAGT 300327 Query 133637 CAGAGTTTTTACGAAAATCTGCATGGCT 133664 || || || ||||| ||||||||| || Sbjct 300326 GAGGGTCTTCACGAAGATCTGCATGTCT 300299 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | ||||||||| ||||| || || || ||| | ||| ||| |||||||| Sbjct 301075 ATGCAAGGTGGACTCCTTCTGAATGTTATAGTCGGAAAGAGTGCGGCCGTCTTCGAGCTG 301016 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 |||||||||| | || | ||||||||||| || || ||||| ||||| || ||||| Sbjct 301015 CTTGCCCGCGAAGATCAAGCGCTGCTGGTCCGGGGGAATGCCCTCCTTATCTTGAATCTT 300956 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||| | | || | |||||| | | ||| || |||| || | || ||||| || Sbjct 300955 CGCCTTCACGTTATCGATCGTGTCAGAAGACTCGACCTCGAGCGTAATCGTCTTGCCCGT 300896 Query 133637 CAGAGTTTTTACGAAAATCTGCAT 133660 || || || |||||||| ||||| Sbjct 300895 GAGGGTCTTGACGAAAATTTGCAT 300872 >seq1 Length=3258266 Score = 125 bits (138), Expect = 7e-24 Identities = 147/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||| ||||| ||||| |||||||||||| | |||| | ||||| ||||| || || Sbjct 2272123 GGTAGACTCCTTCTGGATATTGTAATCGGAAAGCGTGCGCCCATCCTCAAGCTGTTTACC 2272064 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || |||||||||||||||||||| || |||||||| ||||| ||| Sbjct 2272063 AGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGAATCTTCGCCTT 2272004 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||| | | |||||| || | |||| ||| ||||| |||| || Sbjct 2272003 GACATTGTCGATAGTGTCCGAAGACTCCACTTCAAGAGTGATGGTCTTGCCCGTCAATGT 2271944 Query 133643 TTTTACGAAAATCTGCATG 133661 || ||||| ||||||||| Sbjct 2271943 CTTGACGAAGATCTGCATG 2271925 Score = 118 bits (130), Expect = 1e-21 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||||||||| |||||||||||| | || | ||||| | |||||| || Sbjct 2272404 GTAGACTCTTTCTGAATATTGTAATCGGAGAGAGTTCGCCCATCCTCCAACTGCTTTCCA 2272345 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | || | ||| |||||||||||||| || ||||||||||| ||||| ||| Sbjct 2272344 GCGAAGATCAACCGTTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAATCTTCGCCTTC 2272285 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | |||| ||||| | | ||| || |||| |||| || || || |||| ||| Sbjct 2272284 ACGTTGTCAATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTCTTCCCCGTCAAAGTC 2272225 Query 133644 TTTACGAAAATCTGCATG 133661 |||||||||||||||||| Sbjct 2272224 TTTACGAAAATCTGCATG 2272207 Score = 111 bits (122), Expect = 2e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| | || | | | ||||||||||||||||| Sbjct 2272689 GTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTCCGGCCA-TCCTCGAGCTGCTTGCC 2272631 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| |||| || ||||| || || || |||||||| ||||| || |||||| || Sbjct 2272630 CGCAAAAATAAGGCGCTGTTGATCCGGTGGGATGCCCTCCTTATCCTGGATCTTCGCTTT 2272571 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||||| | ||| || || | ||||| ||| ||||| ||||| || Sbjct 2272570 GACATTATCGATTGTGTCGGACGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGGGT 2272511 Query 133643 TTTTACGAAAATCTGCAT 133660 ||| || || |||||||| Sbjct 2272510 TTTCACAAAGATCTGCAT 2272493 Score = 109 bits (120), Expect = 5e-19 Identities = 149/206 (72%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGC 133514 ||| | |||| ||||||||| || |||||||| | | ||| ||| |||||| | Sbjct 2272924 ATGGAGGGTGCTCTCTTTCTGAATGTTGTAATC--CGAAAGTGTGCGACCGTCCTCCAAT 2272867 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||||||||| |||| || || |||||||| || ||||||||||||||||| ||| Sbjct 2272866 TGCTTGCCCGCAAAAATCAGGCGTTGCTGGTCCGGCGGGATGCCTTCCTTGTCTTGAATC 2272807 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||| | | || | |||||| | | ||| || || | |||| || ||||| Sbjct 2272806 TTCGCCTTCACATTATCGATCGTGTCCGAAGACTCTACCTCCAACGTGATTGTCTTGCCT 2272747 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || || ||||| |||||||| Sbjct 2272746 GTGAGGGTCTTGACGAAGATCTGCAT 2272721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420715401360