Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457955.1_202015-11-
03] 14 sequences; 27,988,318 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq5 89.7 5e-13
seq1 84.2 2e-11
>seq5
Length=2330625
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 148111 TAGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGA 148170
||||| || || ||| ||| | ||| | || || || |||||||| | || ||| |||
Sbjct 511770 TAGATTCCCTCAATGGAGTCATCTTTCATGCAAACCAGGAAACACGAGCTCAATTGAGGA 511711
Query 148171 ATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATC 148230
| | || ||||| ||| || || || ||||| || || | || ||||
Sbjct 511710 TTGGGTGTACCCGCGTTGAAGAGTGTTGGTGAGGCGTGAGTGAAGTAACGTTCGGACATC 511651
Query 148231 ATGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGC 148290
| | || || ||||||||| |||| || ||||||||||||| | || ||||||
Sbjct 511650 AGGTTGTAGGTTTCAATAGCGCGATCGACATCAGCGCCGTGAATGCCGACAGCTACGCGC 511591
Query 148291 ATGAGCATGTGCTGTGGTCGTTCGGCAAC 148319
|||| |||||||||||| ||||| || ||
Sbjct 511590 ATGATCATGTGCTGTGGACGTTCTGCGAC 511562
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 148111 TAGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGA 148170
||||| || || ||| ||| | ||| | || || || |||||||| | || ||| |||
Sbjct 512367 TAGATTCCCTCAATGGAGTCATCTTTCATGCAAACCAGGAAACACGAGCTCAATTGAGGA 512308
Query 148171 ATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATC 148230
| | || ||||| ||| || || || ||||| || || | || ||||
Sbjct 512307 TTGGGTGTACCCGCGTTGAAGAGTGTTGGTGAGGCGTGAGTGAAGTAACGTTCGGACATC 512248
Query 148231 ATGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGC 148290
| | || || ||||||||| |||| || ||||||||||||| | || ||||||
Sbjct 512247 AGGTTGTAGGTTTCAATAGCGCGATCGACATCAGCGCCGTGAATGCCGACAGCTACGCGC 512188
Query 148291 ATGAGCATGTGCTGTGGTCGTTCGGCAAC 148319
|||| |||||||||||| ||||| || ||
Sbjct 512187 ATGATCATGTGCTGTGGACGTTCTGCGAC 512159
>seq1
Length=3258266
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| || || |||||||||||| | ||| || ||| |||||||| || || | |
Sbjct 2272686 GACTCCTTCTGGATGTTGTAGTCGGAAAGGGTCCGGCCATCCTCGAGCTGCTTGCCCGCA 2272627
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
| || || ||||||||||| || || ||||| || ||||| || || ||| |
Sbjct 2272626 AAAATAAGGCGCTGTTGATCCGGTGGGATGCCCTCCTTATCCTGGATCTTCGCTTTGACA 2272567
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | || |||| || ||| || || | || | || || |||||||| |||||
Sbjct 2272566 TTATCGATTGTGTCGGACGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTTTTC 2272507
Query 132110 ATGAAAATCTGCAT 132123
| || ||||||||
Sbjct 2272506 ACAAAGATCTGCAT 2272493
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476611116593040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |