Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457955.1_202015-11-
03] 14 sequences; 27,988,318 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq3 102 3e-16
>seq3
Length=3164952
Score = 102 bits (112), Expect = 3e-16
Identities = 117/156 (75%), Gaps = 1/156 (1%)
Strand=Plus/Minus
Query 443706 GAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTC 443765
|||||| ||||||| || || | || || || | || || ||| |||| |||||
Sbjct 1890310 GAGCGATTAGTCGCCTTCGCCGCTGTGGAGGGCATTTTCTTCTCCGGTT-CTTTCGCCTC 1890252
Query 443766 CATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGAT 443825
|||||||||||||| |||||||| || |||| || || ||||| || ||||| ||
Sbjct 1890251 AATCTTCTGGTTGAAGAAGCGTGGCCTCATGCCTGGACTCACCTTCTCCAATGAACTCAT 1890192
Query 443826 CAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTG 443861
|||||| |||||||| ||||| ||||||||| ||
Sbjct 1890191 CAGTCGTGACGAGGGAATGCATACCGACTTCGCATG 1890156
Score = 91.5 bits (100), Expect = 5e-13
Identities = 111/150 (74%), Gaps = 1/150 (1%)
Strand=Plus/Plus
Query 443715 GTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTG 443774
|| || || || | ||| ||||| | || || ||| | |||| || || ||||||||
Sbjct 1892333 GTGGCGTTCGCGGCGGTAGAAGGGATCTTCTTCTCCGG-ATCTTTTGCTTCAATCTTCTG 1892391
Query 443775 GTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAGTCGGGA 443834
| |||| || || || || |||| ||| | |||||| |||||||||||| ||||||||
Sbjct 1892392 GCTGAAGAAACGAGGTCTCATGCCTGGTTTAACCTTTTCTAACGAACTGATTAGTCGGGA 1892451
Query 443835 CGAGGGTTTGCATTGCGACTTCGCCTGTCT 443864
||| || ||||| || || ||||||||
Sbjct 1892452 CGAAGGGATGCATACAGATTTTGCCTGTCT 1892481
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588335715092230
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |