Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457955.1_202015-11-
03] 14 sequences; 27,988,318 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq6 178 3e-39
seq1 172 1e-37
seq8 89.7 1e-12
>seq6
Length=2247897
Score = 178 bits (196), Expect = 3e-39
Identities = 163/206 (79%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 210909 AGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGC 210968
|| ||||| || ||||| || ||||||||||| |||| |||||| | || || || |||
Sbjct 300508 AGATGAAGGGTCGACTCCTTCTGGATGTTATAGTCCGAAAGGGTGCGGCCGTCCTCGAGC 300449
Query 210969 TGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATC 211028
|||||||| |||||||| | || || ||||| || || | ||||||||||||||| |||
Sbjct 300448 TGCTTGCCCGCGAAGATCAAACGCTGCTGGTCGGGGGGGATTCCTTCCTTGTCCTGAATC 300389
Query 211029 TTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCC 211088
|| |||||||| ||||||||||| || || |||||||| ||||||||||| ||
Sbjct 300388 TTCGCCTTCACGTTATCGATGGTGTCCGAAGACTCCACCTCGAGGGTGATCGTCTTCCCA 300329
Query 211089 GTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| || || | ||||||
Sbjct 300328 GTGAGGGTCTTCACGAAGATCTGCAT 300303
Score = 174 bits (192), Expect = 4e-38
Identities = 162/206 (79%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 210909 AGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGC 210968
|| |||||||| ||||| || ||||| || || |||| ||| || | |||||| || ||
Sbjct 301305 AGATGAAGAGTCGACTCCTTCTGGATATTGTAGTCCGAAAGAGTGCGTCCATCCTCGAGT 301246
Query 210969 TGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATC 211028
|||||||| ||||| || ||||| || |||||||| || | || ||||||||||| |||
Sbjct 301245 TGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGAATC 301186
Query 211029 TTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCC 211088
||| |||||||| ||||| |||||||| || |||||||| ||||||||||| ||
Sbjct 301185 TTTGCCTTCACGTTGTCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTCTTGCCA 301126
Query 211089 GTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||| || || | ||||||
Sbjct 301125 GTCAGGGTCTTGACGAAGATCTGCAT 301100
Score = 161 bits (178), Expect = 2e-34
Identities = 161/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966
|||||||||| ||| ||| || ||||| || || || | ||||| | || || || |
Sbjct 301583 CAAGGTGAAGGGTGCTCTCCTTCTGGATATTGTAGTCAGACAGGGTGCGACCGTCCTCGA 301524
Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026
|||||||||| ||||| || ||||| || ||||| ||||||| |||||||||||||| |
Sbjct 301523 GCTGCTTGCCCGCGAAAATGAGGCGCTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAA 301464
Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086
|||| || || || ||||| ||||| || || ||||| || ||||| ||||| |
Sbjct 301463 TCTTCGCCTTGACATTGTCGATCGTGTCCGAAGACTCGACCTCCAGCGTGATTGTCTTAC 301404
Query 211087 CCGTGAGAGTCTTTACAAACACCTGCATT 211115
||||||| ||||| ||||| | |||||||
Sbjct 301403 CCGTGAGGGTCTTGACAAAGATCTGCATT 301375
Score = 159 bits (176), Expect = 8e-34
Identities = 157/203 (77%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971
|| || || ||||| || || |||||||| || | |||||| | || || || ||||||
Sbjct 300792 TGGAGGGTCGACTCCTTCTGAATGTTATAGTCAGAAAGGGTGCGGCCGTCCTCGAGCTGC 300733
Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031
||||| |||||||| | ||| || |||||||| || | || |||||||||||||||||
Sbjct 300732 TTGCCCGCGAAGATCAAGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTG 300673
Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091
|| ||||| ||||| |||||||| || |||||||| |||||||||||||| ||
Sbjct 300672 GCCTTGACGTTATCGATCGTGTCAGATGACTCCACCTCGAGCGTGATCGTCTTTCCAGTC 300613
Query 211092 AGAGTCTTTACAAACACCTGCAT 211114
| ||||| || || | ||||||
Sbjct 300612 AACGTCTTCACGAAGATCTGCAT 300590
Score = 158 bits (174), Expect = 3e-33
Identities = 170/225 (76%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949
|| ||| || | ||||| || || | |||||||| || || |||||||| || | |||
Sbjct 301096 TCCACGTAGACGAAGGACGAGATGCAAGGTGGACTCCTTCTGAATGTTATAGTCGGAAAG 301037
Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009
|| | || ||||| ||||||||||| |||||||| | ||| || ||||| || ||||
Sbjct 301036 AGTGCGGCCGTCTTCGAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCCGGGGGAAT 300977
Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069
|| ||||| || || ||||| |||||||| ||||| |||||||| || |||||
Sbjct 300976 GCCCTCCTTATCTTGAATCTTCGCCTTCACGTTATCGATCGTGTCAGAAGACTCGACCTC 300917
Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||| || |||||||| |||||||| ||||| || || | |||||
Sbjct 300916 GAGCGTAATCGTCTTGCCCGTGAGGGTCTTGACGAAAATTTGCAT 300872
>seq1
Length=3258266
Score = 172 bits (190), Expect = 1e-37
Identities = 163/208 (78%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966
||||||| | ||| |||||||| || || || ||||| | || || | ||||| ||||
Sbjct 2272415 CAAGGTGCAAAGTAGACTCTTTCTGAATATTGTAATCGGAGAGAGTTCGCCCATCCTCCA 2272356
Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026
|||||| || |||||||| | ||||| ||||| ||||||| |||||||||||||| |
Sbjct 2272355 ACTGCTTTCCAGCGAAGATCAACCGTTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAA 2272296
Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086
|||| |||||||| || || ||||| || || |||||||||||||||||||| |
Sbjct 2272295 TCTTCGCCTTCACGTTGTCAATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTCTTCC 2272236
Query 211087 CCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||| | ||||||||| || | ||||||
Sbjct 2272235 CCGTCAAAGTCTTTACGAAAATCTGCAT 2272208
Score = 165 bits (182), Expect = 2e-35
Identities = 169/221 (76%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
||||| | |||||||||||||| || ||||| || |||||||| || || | |||||||
Sbjct 2272713 CGAAGACGGAGGACAAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTC 2272654
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| ||||| || ||||||||||| || || |||||||| ||||| || || || | ||
Sbjct 2272653 CGGCCATCCTCGAGCTGCTTGCCCGCAAAAATAAGGCGCTGTTGATCCGGTGGGATGCCC 2272594
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
||||| ||||||||||| ||| || || ||||| ||||| || || ||||| |
Sbjct 2272593 TCCTTATCCTGGATCTTCGCTTTGACATTATCGATTGTGTCGGACGACTCGACCTCCAAG 2272534
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| || || || || || ||||| | ||||||
Sbjct 2272533 GTGATGGTCTTGCCAGTCAGGGTTTTCACAAAGATCTGCAT 2272493
Score = 145 bits (160), Expect = 2e-29
Identities = 157/208 (75%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966
|||||||||| || ||||| || ||||| || ||||| | ||| || | ||||| || |
Sbjct 2272133 CAAGGTGAAGGGTAGACTCCTTCTGGATATTGTAATCGGAAAGCGTGCGCCCATCCTCAA 2272074
Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026
|||| || || ||||||||||| || || ||||| ||||| | || ||||||||||| |
Sbjct 2272073 GCTGTTTACCAGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGAA 2272014
Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086
|||| || || || ||||| ||||| || || || || |||||||| ||||| |
Sbjct 2272013 TCTTCGCCTTGACATTGTCGATAGTGTCCGAAGACTCCACTTCAAGAGTGATGGTCTTGC 2271954
Query 211087 CCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||| | ||||| || || | ||||||
Sbjct 2271953 CCGTCAATGTCTTGACGAAGATCTGCAT 2271926
Score = 132 bits (146), Expect = 1e-25
Identities = 153/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 210909 AGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGC 210968
|| || || ||| |||||| || ||||| ||||||| ||| || | || || ||||
Sbjct 2272926 AGATGGAGGGTGCTCTCTTTCTGAATGTTGTAATCCGAAAGTGTGCGACCGTCCTCCAAT 2272867
Query 210969 TGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATC 211028
|||||||| || || || |||||||| ||||| || || | ||||||||||| || |||
Sbjct 2272866 TGCTTGCCCGCAAAAATCAGGCGTTGCTGGTCCGGCGGGATGCCTTCCTTGTCTTGAATC 2272807
Query 211029 TTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCC 211088
|| ||||| || ||||| ||||| || || ||||| | ||||| ||||| ||
Sbjct 2272806 TTCGCCTTCACATTATCGATCGTGTCCGAAGACTCTACCTCCAACGTGATTGTCTTGCCT 2272747
Query 211089 GTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| || || | ||||||
Sbjct 2272746 GTGAGGGTCTTGACGAAGATCTGCAT 2272721
Score = 113 bits (124), Expect = 1e-19
Identities = 89/107 (83%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070
|||||||||||||||||||| ||| ||||| |||||||||||||| || |||||
Sbjct 638465 CCTTCCTTGTCCTGGATCTTGGCTTTGACGTTGTCGATGGTGTCAGAAGACTCCACCTCA 638524
Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| ||||||||||| |||||||| ||||| || || | |||||||||
Sbjct 638525 AGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATTTT 638571
Score = 93.3 bits (102), Expect = 1e-13
Identities = 83/104 (80%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||||||||| ||||| || |||||||| || || || |||| |||||
Sbjct 638296 AGGACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGTGTCCGGCCATCC 638355
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006
|| ||||||||||| |||||||| ||||| || || ||||| ||
Sbjct 638356 TCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGATCAGGGGG 638399
>seq8
Length=1872454
Score = 89.7 bits (98), Expect = 1e-12
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||||||||| || || ||||| ||||||||||||||||| ||||| | || |||
Sbjct 434453 AGGACAAGGTGGAGGGTAGACTCCTTTTGGATGTTATAATCGCTGAGGGTGCGACCGTCT 434512
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006
|| |||||||| || || || || ||||| || ||||| || ||
Sbjct 434513 TCGAGCTGCTTTCCGGCAAAAATCAGGCGCTGCTGGTCGGGTGG 434556
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159151792077110
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