Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457955.1_202015-11-
03] 14 sequences; 27,988,318 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq6 102 6e-17
>seq6
Length=2247897
Score = 102 bits (112), Expect = 6e-17
Identities = 206/300 (69%), Gaps = 8/300 (3%)
Strand=Plus/Plus
Query 27385 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCC--- 27441
|||||||| |||| || |||||| || | ||| |||||| |||| ||| | |
Sbjct 2221437 GGGTTCCAAGCGCTCAAGATGATTCGGCGGTCAG-TGGGTTCCTCCT--TGATCTTCCGA 2221493
Query 27442 ACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTC-TACCCTCATGTCCGTGTA 27500
| | | | | | || |||||||| ||| || | ||||| | | || ||| ||
Sbjct 2221494 ATGACCTCTCGGAGTTGATCCACGCCCTCTCCGGTATAGTCCTTTTCGCAA-TCCACATA 2221552
Query 27501 CTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT 27560
|| || || ||||||||||| || ||||||||||| || ||||| ||||| || ||
Sbjct 2221553 CTTCGCACCAAAATGCCTCCACTGAAACCCGTACACAGGACCCAGATCTCCTTCCCGTCT 2221612
Query 27561 GTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTAC 27620
||| ||| || | ||| || ||||| || | || || || ||||||| || || ||
Sbjct 2221613 GTGACCGAGCCCTCGCTTCTCTAAAAATTCCTTTGACCCATTCCCGTCCCAAATTTTCAC 2221672
Query 27621 CCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTC 27680
|||||| ||||| |||||| ||||| ||| | || ||||| || ||||| ||
Sbjct 2221673 GGCCTTCTTTGAGAGAATAGTGGAGTCCGTGGAGCCTTTCACAAACCAGAGAAGCTCTTC 2221732
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369507136952834
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |