Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457995.1_202015-11-
03] 14 sequences; 27,530,324 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq5 87.8 4e-12
>seq5
Length=2324656
Score = 87.8 bits (96), Expect = 4e-12
Identities = 167/246 (68%), Gaps = 0/246 (0%)
Strand=Plus/Plus
Query 248826 CTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGA 248885
||||| |||||| ||| ||||| || || || || || ||||| ||| ||
Sbjct 533921 CTTTGGTTTCAAGACGTTGGAGCGCTCTTACCTTCTTCGGATCAATGGCCGTGTCGCAGA 533980
Query 248886 ACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAG 248945
||| ||||||||| | ||||| || |||||||| |||||| | ||| | || |
Sbjct 533981 ACGTCCACAGCACATGATCATGCGCGTAGCTGTCGGCATTCACGGCGCTGATGTCGATCG 534040
Query 248946 CGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACGCT 249005
|| | || || |||| | ||| ||||| | | || || ||| |||| || ||
Sbjct 534041 CGCTATTGAAACCTACAACCTGATGTCCGAACGTTACTTCACTCACGCCTCACCAACACT 534100
Query 249006 CTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGA 249065
||||||||| ||||| ||| ||| |||||||||| || || || |||| ||||
Sbjct 534101 CTTCAACGCGGGTACACCCAATCCTCAATTGAGCTCGTGTTTCCTGGTTTGCATGAAAGA 534160
Query 249066 CGACTC 249071
|||||
Sbjct 534161 TGACTC 534166
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073766207393152
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |