Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457995.1_202015-11-
03] 14 sequences; 27,530,324 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq3 87.8 1e-12
>seq3
Length=3024150
Score = 87.8 bits (96), Expect = 1e-12
Identities = 114/158 (72%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809
|| || ||||| || ||||| || | || || || || ||||| | || |||||||||
Sbjct 1898799 GCGTTCGCGGCGGTAGAAGGGATCTTCTTCTCCGGATCTTTTGCTTCAATCTTCTGGCTG 1898858
Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869
|||||||| |||||||| || || | ||||| ||||| ||||||| || ||||||
Sbjct 1898859 AAGAAACGAGGTCTCATGCCTGGTTTAACCTTTTCTAACGAACTGATTAGTCGGGACGAA 1898918
Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCA 22907
|| | || || ||||| ||| | |||| || ||
Sbjct 1898919 GGGATGCATACAGATTTTGCCTGTCTCTTGTTCAGTCA 1898956
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356233539217642
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |