Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457995.1_202015-11-
03] 14 sequences; 27,530,324 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq1 100 2e-16
>seq1
Length=3320137
Score = 100 bits (110), Expect = 2e-16
Identities = 153/216 (71%), Gaps = 9/216 (4%)
Strand=Plus/Minus
Query 33160 CACCAAA-TGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG---- 33214
|||||| ||||| || |||||||| || ||||||||||| || | ||||| |
Sbjct 2298607 CACCAAGGTGCAAAGTAGACTCTTTCTGAATATTGTAATCGGAGA----GAGTTCGCCCA 2298552
Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274
|| ||||| ||||||||| || || || ||||||||||| | || || ||||| ||
Sbjct 2298551 TCCTCCAACTGCTTTCCAGCGAAGATCAACCGTTGCTGGTCGGGAGGAATCCCTTCCTTG 2298492
Query 33275 TCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATC 33334
|| |||| | || || | | ||| ||||| | | || || ||||| |||
Sbjct 2298491 TCCTGAATCTTCGCCTTCACGTTGTCAATAGTGTCCGAAGACTCGACCTCGAGAGTGATC 2298432
Query 33335 GTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370
|| || ||||| | ||| ||||||||||| ||||||
Sbjct 2298431 GTCTTCCCCGTCAAAGTCTTTACGAAAATCTGCATG 2298396
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 318777545608572
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |