Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457995.1_202015-11- 03] 14 sequences; 27,530,324 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq8 96.9 2e-15 >seq8 Length=1850677 Score = 96.9 bits (106), Expect = 2e-15 Identities = 82/102 (80%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 11429 AAATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCG 11488 ||| | || || || | |||| ||| ||||| | | |||||||||| |||||||| Sbjct 373380 AAAAAAAGGATAAAGAGAAAAGGAAAGTGGCCAACGTGGGGATCGAACCCAAGACCTTCG 373439 Query 11489 CGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||||||||||||||||| ||||||||||||| | ||||| Sbjct 373440 CGTTATTAGCACGACGCTCTAACCAACTGAGCTAGTCGGCCG 373481 Score = 91.5 bits (100), Expect = 8e-14 Identities = 81/102 (79%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 11428 GAAATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTC 11487 |||| | || || | | |||| ||| ||||| | | |||||||||| ||||||| Sbjct 402457 GAAAAAAAGGATAGAGACAAAAGGAAAGTGGCCAACGTGGGGATCGAACCCAAGACCTTC 402398 Query 11488 GCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||||| ||||||||||||| | |||| Sbjct 402397 GCGTTATTAGCACGACGCTCTAACCAACTGAGCTAGTCGGCC 402356 Score = 91.5 bits (100), Expect = 8e-14 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 11453 AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACC 11512 |||||||| | | |||||||||| |||||||||||||||||||||||||||| ||| Sbjct 419486 AATTGGCCAACGTGGGGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACC 419427 Query 11513 AACTGAGCTAATGGGCC 11529 |||||||||| | |||| Sbjct 419426 AACTGAGCTAGTCGGCC 419410 Score = 84.2 bits (92), Expect = 1e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||||||||||||||||||||||||||| |||| |||||||| | || Sbjct 376840 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAGTCGG 376781 Query 11528 CCG 11530 ||| Sbjct 376780 CCG 376778 Lambda K H 0.638 0.410 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261491155383064