Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457995.1_202015-11-
03] 14 sequences; 27,530,324 total letters
Query= NC_005906.1
Length=81755
Score E
Sequences producing significant alignments: (Bits) Value
seq8 96.9 2e-15
>seq8
Length=1850677
Score = 96.9 bits (106), Expect = 2e-15
Identities = 82/102 (80%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 11429 AAATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCG 11488
||| | || || || | |||| ||| ||||| | | |||||||||| ||||||||
Sbjct 373380 AAAAAAAGGATAAAGAGAAAAGGAAAGTGGCCAACGTGGGGATCGAACCCAAGACCTTCG 373439
Query 11489 CGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530
|||||||||||||||||||| ||||||||||||| | |||||
Sbjct 373440 CGTTATTAGCACGACGCTCTAACCAACTGAGCTAGTCGGCCG 373481
Score = 91.5 bits (100), Expect = 8e-14
Identities = 81/102 (79%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 11428 GAAATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTC 11487
|||| | || || | | |||| ||| ||||| | | |||||||||| |||||||
Sbjct 402457 GAAAAAAAGGATAGAGACAAAAGGAAAGTGGCCAACGTGGGGATCGAACCCAAGACCTTC 402398
Query 11488 GCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529
||||||||||||||||||||| ||||||||||||| | ||||
Sbjct 402397 GCGTTATTAGCACGACGCTCTAACCAACTGAGCTAGTCGGCC 402356
Score = 91.5 bits (100), Expect = 8e-14
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 11453 AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACC 11512
|||||||| | | |||||||||| |||||||||||||||||||||||||||| |||
Sbjct 419486 AATTGGCCAACGTGGGGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACC 419427
Query 11513 AACTGAGCTAATGGGCC 11529
|||||||||| | ||||
Sbjct 419426 AACTGAGCTAGTCGGCC 419410
Score = 84.2 bits (92), Expect = 1e-11
Identities = 56/63 (89%), Gaps = 0/63 (0%)
Strand=Plus/Minus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| |||||||||||||||||||||||||||| |||| |||||||| | ||
Sbjct 376840 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAGTCGG 376781
Query 11528 CCG 11530
|||
Sbjct 376780 CCG 376778
Lambda K H
0.638 0.410 0.920
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 261491155383064
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |