Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457995.1_202015-11-
03] 14 sequences; 27,530,324 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq3 93.3 4e-14
>seq3
Length=3024150
Score = 93.3 bits (102), Expect = 4e-14
Identities = 173/254 (68%), Gaps = 0/254 (0%)
Strand=Plus/Plus
Query 21467 AACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAA 21526
|||| ||| ||||| || || ||||| || || || | ||| || | |||||| ||
Sbjct 1896610 AACAGCAAGCATGCGAAGTCGGTATGCATTCCCTCGTCACGACTGATGAGTTCATTGGAG 1896669
Query 21527 AATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCT 21586
|| || | || ||||| | || | ||| || ||||| || ||||| || || | ||
Sbjct 1896670 AAGGTGAGTCCAGGCATGAGGCCACGCTTCTTCAACCAGAAGATTGAGGCGAAAGAACCG 1896729
Query 21587 GAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCT 21646
|| |||||||||||||| || || || || || |||||||| ||| | |||| ||
Sbjct 1896730 GAGAAGAAAATGCCCTCCACAGCGGCGAAGGCGACTAATCGCTCAGCAAATGTGGAGCGA 1896789
Query 21647 TTATCCAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCA 21706
||| | ||||| | |||||| | ||||| ||| | ||| ||| || |||
Sbjct 1896790 CGATCGGAGATCCAGCGTAGTGCCCAGTCCGCCTTCCTTTTGACACAGGGAATGGTCTCA 1896849
Query 21707 ATAGCTTTTAAAAG 21720
| ||| | |||||
Sbjct 1896850 ACAGCATCGAAAAG 1896863
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531900706917360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |