Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457995.1_202015-11- 03] 14 sequences; 27,530,324 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq1 105 6e-18 >seq1 Length=3320137 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| ||||| ||||| ||||||||| | ||| || ||| || | || || ||| Sbjct 2298593 GTAGACTCTTTCTGAATATTGTAATCGGAGAGAGTTCGCCCATCCTCCAACTGCTTTCCA 2298534 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| | || || ||||| |||||||| ||||| ||||| |||||| || Sbjct 2298533 GCGAAGATCAACCGTTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAATCTTCGCCTTC 2298474 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| ||||| | || ||||| || | || | ||| || || |||| ||| Sbjct 2298473 ACGTTGTCAATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTCTTCCCCGTCAAAGTC 2298414 Query 114366 TTTACAAAAATCTGCATG 114383 ||||| |||||||||||| Sbjct 2298413 TTTACGAAAATCTGCATG 2298396 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| || || || || ||||||||| | || || ||| ||||| ||||||||| Sbjct 2298311 GTAGACTCCTTCTGGATATTGTAATCGGAAAGCGTGCGCCCATCCTCAAGCTGTTTACCA 2298252 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| |||||||| ||||| ||||| || || || ||||| |||||| || Sbjct 2298251 GCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGAATCTTCGCCTTG 2298192 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | ||||| | || || || || | || | || ||||| |||| || Sbjct 2298191 ACATTGTCGATAGTGTCCGAAGACTCCACTTCAAGAGTGATGGTCTTGCCCGTCAATGTC 2298132 Query 114366 TTTACAAAAATCTGCATG 114383 || || || ||||||||| Sbjct 2298131 TTGACGAAGATCTGCATG 2298114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420134328314568