Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457995.1_202015-11-
03] 14 sequences; 27,530,324 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq1 102 8e-17
seq8 96.9 3e-15
seq6 91.5 1e-13
>seq1
Length=3320137
Score = 102 bits (112), Expect = 8e-17
Identities = 146/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 64238 AGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGC 64297
|| |||| || || || || || || |||||||| | | |||||| | || ||||||
Sbjct 2298320 AGGTGAAGGGTAGACTCCTTCTGGATATTGTAATCGGAAAGCGTGCGCCCATCCTCAAGC 2298261
Query 64298 TGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATT 64357
|| || || || | || || ||||||||||||||||| || || || || || || ||
Sbjct 2298260 TGTTTACCAGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGAATC 2298201
Query 64358 TTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCG 64417
|| ||| ||| || | || || | |||||||| | ||| | |||||||||
Sbjct 2298200 TTCGCCTTGACATTGTCGATAGTGTCCGAAGACTCCACTTCAAGAGTGATGGTCTTGCCC 2298141
Query 64418 GTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| || || ||||| || |||||
Sbjct 2298140 GTCAATGTCTTGACGAAGATCTGCAT 2298115
Score = 98.7 bits (108), Expect = 1e-15
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || ||||| ||||| |||||||| | || || ||| | || || | |||||| ||
Sbjct 2298593 GTAGACTCTTTCTGAATATTGTAATCGGAGAGAGTTCGCCCATCCTCCAACTGCTTTCCA 2298534
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| | || | ||| ||||||||||||||||| ||||| || || || || || |||
Sbjct 2298533 GCGAAGATCAACCGTTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAATCTTCGCCTTC 2298474
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| || | || || | || || || | ||| | ||||| || ||||||||
Sbjct 2298473 ACGTTGTCAATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTCTTCCCCGTCAAAGTC 2298414
Query 64427 TTTACGAAAATTTGCAT 64443
||||||||||| |||||
Sbjct 2298413 TTTACGAAAATCTGCAT 2298397
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||||||||| | | || || || |||| |||||| || || || |||||||| || |
Sbjct 2298909 ACCGCCGCGAAGACGGAGGACAAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGA 2298850
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||| || | || || ||||||||||| ||| |||| || ||||| || || || ||
Sbjct 2298849 AAGGGTCCGGCCATCCTCGAGCTGCTTGCCCGCAAAAATAAGGCGCTGTTGATCCGGTGG 2298790
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394
|| || || || || || | | || ||||| ||| || | ||| || | || |
Sbjct 2298789 GATGCCCTCCTTATCCTGGA-TCTTCGCTTTGACATTATCGATTGTGTCGGACGACTCGA 2298731
Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
| || | || | ||||||||| |||| ||||| || || || |||||
Sbjct 2298730 CCTCCAAGGTGATGGTCTTGCCAGTCAGGGTTTTCACAAAGATCTGCAT 2298682
Score = 84.2 bits (92), Expect = 2e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312
||||| |||||||||||||| | | ||||| |||| || | |||||||| ||| ||
Sbjct 2299100 TCTTTCTGAATGTTGTAATCCGAAAGTGTGCGACCGTCCTCCAATTGCTTGCCCGCAAAA 2299041
Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372
|| || || |||||||| || || || ||||| || ||||| || || ||| |||
Sbjct 2299040 ATCAGGCGTTGCTGGTCCGGCGGGATGCCTTCCTTGTCTTGAATCTTCGCCTTCACATTA 2298981
Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432
|| | || || | || || || | || | |||||||| || | || || |||
Sbjct 2298980 TCGATCGTGTCCGAAGACTCTACCTCCAACGTGATTGTCTTGCCTGTGAGGGTCTTGACG 2298921
Query 64433 AAAATTTGCAT 64443
|| || |||||
Sbjct 2298920 AAGATCTGCAT 2298910
>seq8
Length=1850677
Score = 96.9 bits (106), Expect = 3e-15
Identities = 95/123 (77%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| ||||||| | ||| || || || | || || || ||||| ||||| |||||
Sbjct 435833 ACCACCGCGCAGACGAAGGACAAGGTGGAGGGTAGACTCCTTTTGGATGTTATAATCGCT 435892
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| |||||| ||||||| |||||||| |||||| |||| || |||||||||||||| ||
Sbjct 435893 GAGGGTGCGACCGTCTTCGAGCTGCTTTCCGGCAAAAATCAGGCGCTGCTGGTCGGGTGG 435952
Query 64336 AAT 64338
||
Sbjct 435953 GAT 435955
>seq6
Length=2129081
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || ||||| | || || || || |||||||| || || | | ||||| ||||
Sbjct 300214 AAGGACGAGATGCAAGGTGGACTCCTTCTGAATGTTATAGTCGGAAAGAGTGCGGCCGTC 300155
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
||| ||||||||||| || | || | ||||||||||| || ||||| || || || ||
Sbjct 300154 TTCGAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCCGGGGGAATGCCCTCCTTATC 300095
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
||| || || ||| || || | || ||| | || || || | || | ||
Sbjct 300094 TTGAATCTTCGCCTTCACGTTATCGATCGTGTCAGAAGACTCGACCTCGAGCGTAATCGT 300035
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||||| || | || || ||||||||||||||
Sbjct 300034 CTTGCCCGTGAGGGTCTTGACGAAAATTTGCAT 300002
Score = 89.7 bits (98), Expect = 5e-13
Identities = 84/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312
|| || || || ||||| || | | |||||| |||| || ||||||||||| || ||
Sbjct 300696 TCCTTCTGGATATTGTAGTCAGACAGGGTGCGACCGTCCTCGAGCTGCTTGCCCGCGAAA 300637
Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTT 64359
||||| |||||||||||||||||||| ||||| || || || || ||
Sbjct 300636 ATGAGGCGCTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAATCTT 300590
Score = 84.2 bits (92), Expect = 2e-11
Identities = 142/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 64238 AGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGC 64297
||||||| ||||| || || || || ||||| || | | ||||| | || || ||
Sbjct 300435 AGATGAAGAGTCGACTCCTTCTGGATATTGTAGTCCGAAAGAGTGCGTCCATCCTCGAGT 300376
Query 64298 TGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATT 64357
|||||||| || ||||||| ||||||||||| || || || || || || || || ||
Sbjct 300375 TGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGAATC 300316
Query 64358 TTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCG 64417
||| ||| || || | || ||| | || || || | || | ||||||||
Sbjct 300315 TTTGCCTTCACGTTGTCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTCTTGCCA 300256
Query 64418 GTCAAAGTTTTTACGAAAATTTGCAT 64443
|||| || || ||||| || |||||
Sbjct 300255 GTCAGGGTCTTGACGAAGATCTGCAT 300230
Score = 82.4 bits (90), Expect = 8e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 64238 AGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGC 64297
||||||| ||||| || || || ||||| || || | | |||||| |||| || |||
Sbjct 299640 AGATGAAGGGTCGACTCCTTCTGGATGTTATAGTCCGAAAGGGTGCGGCCGTCCTCGAGC 299581
Query 64298 TGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATT 64357
|||||||| || | || | |||||||||||||| || ||||| || || || || ||
Sbjct 299580 TGCTTGCCCGCGAAGATCAAACGCTGCTGGTCGGGGGGGATTCCCTCCTTGTCCTGAATC 299521
Query 64358 TTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCG 64417
|| ||| || || | || || | ||||| || | || | ||||| ||
Sbjct 299520 TTCGCCTTCACGTTATCGATGGTGTCCGAAGACTCCACCTCGAGGGTGATCGTCTTCCCA 299461
Query 64418 GTCAAAGTTTTTACGAAAATTTGCATTTTAATAAT 64452
|| | || || ||||| || ||||| | |||||
Sbjct 299460 GTGAGGGTCTTCACGAAGATCTGCATGTCTATAAT 299426
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499644712562160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |