Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457995.1_202015-11- 03] 14 sequences; 27,530,324 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq2 205 1e-47 >seq2 Length=2980060 Score = 205 bits (226), Expect = 1e-47 Identities = 257/353 (73%), Gaps = 0/353 (0%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||||||||| || || || || || || ||||| || |||||||| Sbjct 1659763 TCGAAGTCCTCACCACCCAAGTGGGTGTCACCGGCAGTGGCCTTGACCTCGAAGATACCC 1659704 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || ||| | | | || ||||| || || || || || || || || ||||| ||| Sbjct 1659703 TCCTCGATGGTAAGAAGAGACACATCGAAAGTTCCTCCTCCGAGATCGAAGATGAGGACG 1659644 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| || ||||| |||||||| ||||| ||||| || || || || || Sbjct 1659643 TTGCGCTCGCCGATCACCTTCTTGTCGAGACCATACGCAATAGCGGCGGCGGTGGGCTCG 1659584 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || ||||||||||| ||||| || | || ||| | || || || || || || || Sbjct 1659583 TTGATAATACGAAGGATGTTCATTCCGGAGATGGTTCCGGCGTCCTTGGTAGCCTGACGC 1659524 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 ||||| ||||| ||||| || |||||||| ||||| |||| |||||| || | ||||| Sbjct 1659523 TGCGAGTCGTTGAAGTACGCAGGGACCGTCACGACGGCGTTCGTGACGGTCGTGCCGAGG 1659464 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 || || || ||| | || ||||| || ||||||||||| || |||||||| Sbjct 1659463 TAAGACTCAGCGGTCTCCTTCATCTTCAAGAGAACCATCGAGGAGATCTCTTC 1659411 Score = 140 bits (154), Expect = 4e-28 Identities = 193/268 (72%), Gaps = 4/268 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||||||||| || || || ||||| || ||||| | |||| ||| Sbjct 878337 TCGAAGTCCTCACCACCCAAGTGGGTGTCGCCGGCGGTGGCCTTGACGGCGAAGACACCG 878396 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || ||||| | | ||| ||||| || || || ||||| || || || ||||| ||| Sbjct 878397 CCGCTGATGTTGAGGAGCGAGACATCGAAAGTTCCTCCACCGAGATCGAAGATGAGGACG 878456 Query 7577 TTCGTATCGTCGTCTTTG--TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634 || ||| ||||| | | || ||||||||||| ||||| || || || || || | Sbjct 878457 TTGCGCTCG--GTCTTCGATTGCTGGTCGAGACCGTATGCGATGGCGGCGGCGGTGGGCT 878514 Query 7635 CATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 | || || ||||| || || |||||||| || | | || || || ||||| | | Sbjct 878515 CGTTGATGATACGGAGCACGTCGAGGCCAGCGATGGCGCCGGCGTCCTTGGTCGCGAGAC 878574 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGAC 7722 | ||||| ||||| |||||||| ||||| Sbjct 878575 GCTGCGAGTCGTTGAAGTAGGCAGGGAC 878602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132688851760