Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457995.1_202015-11-
03] 14 sequences; 27,530,324 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq2 205 1e-47
>seq2
Length=2980060
Score = 205 bits (226), Expect = 1e-47
Identities = 257/353 (73%), Gaps = 0/353 (0%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||| || |||||||||||||| || || || || || || ||||| || ||||||||
Sbjct 1659763 TCGAAGTCCTCACCACCCAAGTGGGTGTCACCGGCAGTGGCCTTGACCTCGAAGATACCC 1659704
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| || ||| | | | || ||||| || || || || || || || || ||||| |||
Sbjct 1659703 TCCTCGATGGTAAGAAGAGACACATCGAAAGTTCCTCCTCCGAGATCGAAGATGAGGACG 1659644
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| ||| || ||||| |||||||| ||||| ||||| || || || || ||
Sbjct 1659643 TTGCGCTCGCCGATCACCTTCTTGTCGAGACCATACGCAATAGCGGCGGCGGTGGGCTCG 1659584
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|| ||||||||||| ||||| || | || ||| | || || || || || || ||
Sbjct 1659583 TTGATAATACGAAGGATGTTCATTCCGGAGATGGTTCCGGCGTCCTTGGTAGCCTGACGC 1659524
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
||||| ||||| ||||| || |||||||| ||||| |||| |||||| || | |||||
Sbjct 1659523 TGCGAGTCGTTGAAGTACGCAGGGACCGTCACGACGGCGTTCGTGACGGTCGTGCCGAGG 1659464
Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809
|| || || ||| | || ||||| || ||||||||||| || ||||||||
Sbjct 1659463 TAAGACTCAGCGGTCTCCTTCATCTTCAAGAGAACCATCGAGGAGATCTCTTC 1659411
Score = 140 bits (154), Expect = 4e-28
Identities = 193/268 (72%), Gaps = 4/268 (1%)
Strand=Plus/Plus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||| || |||||||||||||| || || || ||||| || ||||| | |||| |||
Sbjct 878337 TCGAAGTCCTCACCACCCAAGTGGGTGTCGCCGGCGGTGGCCTTGACGGCGAAGACACCG 878396
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
|| ||||| | | ||| ||||| || || || ||||| || || || ||||| |||
Sbjct 878397 CCGCTGATGTTGAGGAGCGAGACATCGAAAGTTCCTCCACCGAGATCGAAGATGAGGACG 878456
Query 7577 TTCGTATCGTCGTCTTTG--TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634
|| ||| ||||| | | || ||||||||||| ||||| || || || || || |
Sbjct 878457 TTGCGCTCG--GTCTTCGATTGCTGGTCGAGACCGTATGCGATGGCGGCGGCGGTGGGCT 878514
Query 7635 CATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694
| || || ||||| || || |||||||| || | | || || || ||||| | |
Sbjct 878515 CGTTGATGATACGGAGCACGTCGAGGCCAGCGATGGCGCCGGCGTCCTTGGTCGCGAGAC 878574
Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGAC 7722
| ||||| ||||| |||||||| |||||
Sbjct 878575 GCTGCGAGTCGTTGAAGTAGGCAGGGAC 878602
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635132688851760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |