Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457995.1_202015-11-
03] 14 sequences; 27,530,324 total letters
Query= NC_018874.1
Length=211518
Score E
Sequences producing significant alignments: (Bits) Value
seq1 89.7 7e-13
>seq1
Length=3320137
Score = 89.7 bits (98), Expect = 7e-13
Identities = 129/180 (72%), Gaps = 4/180 (2%)
Strand=Plus/Minus
Query 197027 CCTCGTCGCTAAAGCCCGTACCGATCTTACAAATGGATTCGTACATCTGGTTGTCGGGAT 197086
|||| ||||| || ||||| |||||||| || || | | | | |||| | ||||| |
Sbjct 1724030 CCTCCTCGCTGAACCCCGTGCCGATCTTGCAGATCGTCTGGAATATCTCGCCGTCGGCGT 1723971
Query 197087 TGTAACAGGCGAGTAAGAAAGCGCCGTAG--GTTCCCGTTCTCTTTCCCACCCCGTTGAA 197144
||| |||||||| ||||| ||||||||| |||| || | ||| ||| |||| | |
Sbjct 1723970 CGTAGCAGGCGAGCAAGAACGCGCCGTAGACGTTC--GTGCGCTTGCCCTTTCCGTAGTA 1723913
Query 197145 GCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTCTTCAG 197204
||| |||| || | || || || | ||||| | ||| | | ||| |||||||||||
Sbjct 1723912 GCCCCCGACGACAGCTAGGTCGAGCGAGTCGCCGAGCCCCGCGAGGTAGTCTTTCTTCAG 1723853
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 676729481572320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |