Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457995.1_202015-11-
03] 14 sequences; 27,530,324 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq3 208 1e-48
>seq3
Length=3024150
Score = 208 bits (230), Expect = 1e-48
Identities = 380/555 (68%), Gaps = 5/555 (1%)
Strand=Plus/Plus
Query 48125 AGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAG 48184
|||| ||| || ||||| | |||| || ||||| || |||||||| | |||||||||
Sbjct 1896613 AGCAAGCATGCGAAGTCGGTATGCATTCCCTCGTCACGACTGATGAGTTCATTGGAGAAG 1896672
Query 48185 CAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAG 48244
||| |||||||||| || | || || | |||||| |||| |||||||| || |||
Sbjct 1896673 GTGAGTCCAGGCATGAGGCCACGCTTCTTCAACCAGAAGATTGAGGCGAAAGAACCGGAG 1896732
Query 48245 AAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTG 48304
||||| ||||||||||| || ||||| ||| | | ||| | || | | |
Sbjct 1896733 AAGAAAATGCCCTCCACAGCGGCGAAGGCGACTAATCGCTCAGCAAATGTGGAGCGACGA 1896792
Query 48305 TCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATG 48364
|| ||||||||| || |||||||| |||||| | |||| || || || ||||| |
Sbjct 1896793 TCGGAGATCCAGCGTAGTGCCCAGTCCGCCTTCCTTTTGACACAGGGAATGGTCTCAACA 1896852
Query 48365 GCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCG 48424
|| ||| || | || || | | |||| | || ||| || || | |
Sbjct 1896853 GCATCGAAAAGGTACTCGCGTTGCTTAGGGTCCTTGATGTAAGTATCGATAAGAAGGGAG 1896912
Query 48425 TACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCA 48484
|| |||| ||| | ||| || || || ||||||||||||||| | ||||||
Sbjct 1896913 TAGGTCTCGCTGTGGATATTTTCCATCATAATTTGGAACCCGTAGAAGCAACGCGCCTCA 1896972
Query 48485 AACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAA 48544
| |||| || || | ||||| | ||| | || ||||| ||||| || ||||| ||
Sbjct 1896973 GCCGCCTGAACCTCGTTCGAGAAGCGCTCAACAAGGTTCTCGTTGACGATGCCATCAGAG 1897032
Query 48545 GCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGC---- 48600
|| ||||| || || |||||||| | || || ||||| |||| | | || ||
Sbjct 1897033 GCGGCAAAAAACGCGAGGACATGCGAGACAAAGTGACGCTCATTGTCGTTAAG-GCGGTT 1897091
Query 48601 ATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAG 48660
||||||| | || | ||||| |||||||| ||||| |||||||||| |||||
Sbjct 1897092 ATTCCAGTCGTGGAGATCTTTTGACAGGTCCATCTCTTCGGCAGTCCAGAAAGACGCTTC 1897151
Query 48661 TGCTTTTTTGTACAT 48675
||||||||||||||
Sbjct 1897152 AGCTTTTTTGTACAT 1897166
Score = 149 bits (164), Expect = 1e-30
Identities = 367/552 (66%), Gaps = 11/552 (2%)
Strand=Plus/Minus
Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190
|||||||| || | |||| ||||||||||| || || || |||| || ||| | |
Sbjct 1898941 CAGGCAAAATCTGTATGCATCCCTTCGTCCCGACTAATCAGTTCGTTAGAAAAGGTTAAA 1898882
Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250
|||||||||| || | | || |||||||| |||| || ||||| || |||||||||
Sbjct 1898881 CCAGGCATGAGACCTCGTTTCTTCAGCCAGAAGATTGAAGCAAAAGATCCGGAGAAGAAG 1898822
Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAG--AAGCGTTCTTGTCTG 48308
|| || || || ||||||||||| | |||| | || | | ||| | ||| |
Sbjct 1898821 ATCCCTTCTACCGCCGCGAACGCTACCAACCTCGTGGCAAACGTCGACCGT--TGGTCAG 1898764
Query 48309 AGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCC 48368
||||||| || ||||| || | ||||| ||||| |||||| || ||||| || |
Sbjct 1898763 AGATCCACCTGAGGGCCCACTCGGTCTTCTGCTTGACGCATGGTATAGTCTCGATCGAAT 1898704
Query 48369 GGAAGAGCTTCTTGCACTCACCT--GCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTA 48426
|||||| ||| | || | ||| | | |||||| || || | |||
Sbjct 1898703 TGAAGAG--GAGGCCACGCTGCTGAGAGTCAGAGATGTAGGTATCGATGAGGAGAGAGTA 1898646
Query 48427 CATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAA 48486
| || ||||| | || || || ||| || || || || || | | | |||
Sbjct 1898645 TGTTTCCGAGTGAATGTTTTCCATCATGATTTGAAATCCATAAAAACAGCGGACTTCAGC 1898586
Query 48487 CACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGC 48546
| || ||||| | || || | ||||| ||||||||| ||||| || || || |||||
Sbjct 1898585 GGCTTGTACTTCGCTCGAAAACCGCTCCACCAGATTCTCGTTGACAATACCGTCGGAAGC 1898526
Query 48547 AGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAG---AGCATT 48603
||||| || || ||||||| | | ||||||||| ||||||| | || | | ||
Sbjct 1898525 GGCAAAAAATGCCAGGACATATGATATGAAATGGCGTTCGTTGTCATTCAGGTTATCGTT 1898466
Query 48604 CCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGC 48663
|||| | | |||||| || || | ||||| ||||| || || || | ||
Sbjct 1898465 CCAGTCGAAGATATCTTTGGACATATCGATCTCTTCGGACGTCCAAAACGAAGCCTGGGC 1898406
Query 48664 TTTTTTGTACAT 48675
||| ||||||||
Sbjct 1898405 TTTCTTGTACAT 1898394
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931532636981760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |