Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457995.1_202015-11- 03] 14 sequences; 27,530,324 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq1 221 2e-52 seq2 168 9e-37 seq6 158 2e-33 seq8 113 6e-20 seq7 107 3e-18 >seq1 Length=3320137 Score = 221 bits (244), Expect = 2e-52 Identities = 187/230 (81%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| ||||||||||||||||| ||||| || || |||||| | ||||| ||||||| Sbjct 2298680 GTATGCAGATCTTTGTGAAAACCCTGACTGGCAAGACCATCACCTTGGAGGTCGAGTCGT 2298739 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | |||||||||||||| ||||||| ||||| || |||||||| ||||| ||||| |||| Sbjct 2298740 CCGACACAATCGATAATGTCAAAGCGAAGATCCAGGATAAGGAGGGCATCCCACCGGATC 2298799 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 | || || ||||||||||| || || ||||| || ||||| || ||||| | || |||| Sbjct 2298800 AACAGCGCCTTATTTTTGCGGGCAAGCAGCTCGAGGATGGCCGGACCCTTTCCGACTACA 2298859 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 || | || |||||||| || || |||||||| || | ||||| || ||| Sbjct 2298860 ACATCCAGAAGGAGTCGACGCTTCACCTTGTCCTCCGTCTTCGCGGCGGT 2298909 Score = 163 bits (180), Expect = 4e-35 Identities = 161/208 (77%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| || || || | || || || || ||||| || || || ||||| || Sbjct 2298115 ATGCAGATCTTCGTCAAGACATTGACGGGCAAGACCATCACTCTTGAAGTGGAGTCTTCG 2298174 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || |||| || |||||||| || ||||| || || || ||||| ||| Sbjct 2298175 GACACTATCGACAATGTCAAGGCGAAGATTCAGGACAAGGAGGGTATCCCTCCCGACCAG 2298234 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || ||||| || ||||||||||||||||| ||||| || || || | |||||||| Sbjct 2298235 CAGCGTCTTATCTTCGCTGGTAAACAGCTTGAGGATGGGCGCACGCTTTCCGATTACAAT 2298294 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTG 172069 | || ||||||||||| || ||||||| Sbjct 2298295 ATCCAGAAGGAGTCTACCCTTCACCTTG 2298322 Score = 147 bits (162), Expect = 3e-30 Identities = 149/194 (77%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| ||||| || || ||||| || || || || ||||| | ||||| ||||| | Sbjct 2298908 GTATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACAATCACGTTGGAGGTAGAGTCTT 2298967 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | ||||| |||||||| | || || ||||||||||| ||||||||||| || || || | Sbjct 2298968 CGGACACGATCGATAATGTGAAGGCGAAGATTCAAGACAAGGAAGGCATCCCGCCGGACC 2299027 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 ||||||| || |||||||| || || || | || || || || || || | ||||||| Sbjct 2299028 AGCAACGCCTGATTTTTGCGGGCAAGCAATTGGAGGACGGTCGCACACTTTCGGATTACA 2299087 Query 172040 ACGTTCAAAAGGAG 172053 || |||| || ||| Sbjct 2299088 ACATTCAGAAAGAG 2299101 Score = 134 bits (148), Expect = 2e-26 Identities = 334/500 (67%), Gaps = 9/500 (2%) Strand=Plus/Minus Query 198450 TTCAAGGATGTTGAGGGTATCGACTCAGCTAAGGATGAGCTCGAGGAGATTGTTGATTTT 198509 |||||||| || | || || ||| || ||||| ||| || |||| |||| | || Sbjct 2114101 TTCAAGGACGTCGCAGGCATGGACGAGGCCAAGGAGGAGATCATGGAGTTTGTCAAATTC 2114042 Query 198510 CTTAAAAACCCCGAAAAGTACTATGGAAG-TGGTGCCCGA-ATCCCACGTGGTGCTCTTC 198567 || || ||||| |||||| | ||| ||| | | | ||||| || ||||| | | Sbjct 2114041 CTCAAGGACCCCACCAAGTACGAA--AAGCTGGGGGCTAAGATCCCTCGCGGTGCCATCC 2113984 Query 198568 TCGCCGGTGCCCCGGGTACTGGTAAAACCCTTCTAGCTCGTGCTATCGCGGGTGAATCGA 198627 || |||| | || ||||| || || || | || ||| || | ||| || ||| ||| Sbjct 2113983 TCTCCGGACCTCCTGGTACAGGAAAGACGTTACTTGCTAAGGCCACCGCCGGCGAAGCGA 2113924 Query 198628 GTGTCCCCTTTCT-TCAGTGCTCCGCGGCGAGTTTCATCGAGATGTTCGTTGGTGTTGGT 198686 | ||||| || || || || ||||| | ||| ||||||||||||| ||||||||| Sbjct 2113923 GCGTCCCTTTCCTCTCCGT-CTCCGGTTCCGAATTCGTCGAGATGTTCGTCGGTGTTGGT 2113865 Query 198687 GCTAAGCGCGTCCGGGAACTCTTTGAGCAAGCACGTGAAAATCAACCATGTATCATCTTC 198746 | ||| || || || || || | | || ||||| || || ||||||||| Sbjct 2113864 TCCTCGCGTGTACGCGACCTTTTCGCGTCCGCGAAGAAAAATGCCCCTTGCATCATCTTC 2113805 Query 198747 ATTGATGAGATTGACGCTGTTGGTAAGAAGCGTGG---TGGAACTACTACACCTGGTAAT 198803 || || || |||||||| | |||||| || || ||| | | ||| || Sbjct 2113804 ATCGACGAAATTGACGCCATCGGTAAGTCACGCGGAAAGGGAGGCAACATGGGTGGGAAC 2113745 Query 198804 GATGAGCGTGAGCAGACGATTAACCAGCTTCTCACTGAGATGGATGGTTTTGACAATGAG 198863 || ||||| ||| |||| | |||||||| || |||||||||||||||| || || Sbjct 2113744 GACGAGCGCGAGTCGACGCTCAACCAGCTCCTTGTCGAGATGGATGGTTTTGGCACGCAG 2113685 Query 198864 ACTGGTATCGTGGTGATTGCTGCTACAAATAGGATTGATATCCTAGATGATGCACTGCTT 198923 | |||| || | || | || |||||| |||| |||| || ||||| | Sbjct 2113684 CAGCATGTCGTCGTACTGGCCGGCACCAATAGGCCTGATGTCCTCGACCCCGCACTCATG 2113625 Query 198924 CGTCCCGGTCGATTCGACCG 198943 |||||||| || |||||||| Sbjct 2113624 CGTCCCGGCCGGTTCGACCG 2113605 Score = 98.7 bits (108), Expect = 1e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || || || ||||| || || || || |||||||| ||||| ||||| || Sbjct 675896 ATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTCT 675837 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 ||||| ||||| ||| ||||||||||||| || || |||||||| Sbjct 675836 GACACCATCGACAACGTCAAAGCCAAGATCCAGGACAAGGAAGG 675793 Score = 93.3 bits (102), Expect = 6e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| || || || || || || || |||||||| || ||||||||||| || Sbjct 2297835 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACTATCACGCTTGAGGTTGAGTCTTCC 2297894 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 || || ||||| || |||| ||||||||||| |||||||| || Sbjct 2297895 GATACCATCGACAATGTCAAGGCCAAGATTCAGGATAAGGAGGG 2297938 >seq2 Length=2980060 Score = 168 bits (186), Expect = 9e-37 Identities = 251/356 (71%), Gaps = 0/356 (0%) Strand=Plus/Plus Query 195632 CCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATG 195691 || ||||| || || || ||||| | | |||||||||||||| || || |||| | | Sbjct 1659408 CCGGAAGAGATCTCCTCGATGGTTCTCTTGAAGATGAAGGAGACCGCTGAGTCTTACCTC 1659467 Query 195692 GGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGA 195751 || | || || | | || || ||||| || ||||| ||||||| || || || || Sbjct 1659468 GGCACGACCGTCACGAACGCCGTCGTGACGGTCCCTGCGTACTTCAACGACTCGCAGCGT 1659527 Query 195752 CAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAA 195811 ||||| || |||||||| | | || | || | ||| ||| | |||||||| || Sbjct 1659528 CAGGCTACCAAGGACGCCGGAACCATCTCCGGAATGAACATCCTTCGTATTATCAACGAG 1659587 Query 195812 CCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTA 195871 || || || || || ||||| |||||||| |||||||| | || || || || Sbjct 1659588 CCCACCGCCGCCGCTATTGCGTATGGTCTCGACAAGAAGGTGATCGGCGAGCGCAACGTC 1659647 Query 195872 TTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGT 195931 | ||||| |||||||| || || || || ||||| || ||||| | || || | ||| Sbjct 1659648 CTCATCTTCGATCTCGGAGGAGGAACTTTCGATGTGTCTCTTCTTACCATCGAGGAGGGT 1659707 Query 195932 ATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 || ||||| || ||||| ||||| ||||| || || | |||||||| || ||||| Sbjct 1659708 ATCTTCGAGGTCAAGGCCACTGCCGGTGACACCCACTTGGGTGGTGAGGACTTCGA 1659763 Score = 107 bits (118), Expect = 3e-18 Identities = 113/149 (76%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 195332 TGTGTTGGTGTATGGCAAAATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGT 195391 || || ||||| ||||| || || ||||| ||||| ||| |||| || || || ||||| Sbjct 1658997 TGCGTGGGTGTGTGGCAGAACGACCGTGTCGAGATCATCGCGAACGATCAGGGTAACCGC 1659056 Query 195392 ACAACTCCATCGTACGTTGCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAA 195451 || ||||| ||||| || |||| | || || || |||||| | || ||||||||||| Sbjct 1659057 ACGACTCCCTCGTATGTCTCCTTCTCCGACAACGAGCGTCTCATCGGTGATGCCGCAAAG 1659116 Query 195452 AATCAGACAGCTATGAACCCTATCAATAC 195480 || ||| || |||||||| ||||| || Sbjct 1659117 AACCAGGTGGCGATGAACCCCATCAACAC 1659145 Score = 104 bits (114), Expect = 3e-17 Identities = 187/271 (69%), Gaps = 8/271 (3%) Strand=Plus/Minus Query 195721 TGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGC 195780 ||| ||||| ||||||| || || || || | ||||| |||||||| | || || || Sbjct 878603 TGTCCCTGCCTACTTCAACGACTCGCAGCGTCTCGCGACCAAGGACGCCGGCGCCATCGC 878544 Query 195781 GGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCT 195840 || || || || | || ||||| || || || || || || || || || ||||| Sbjct 878543 TGGCCTCGACGTGCTCCGTATCATCAACGAGCCCACCGCCGCCGCCATCGCATACGGTCT 878484 Query 195841 GGACAAGAACAAGGACGAAGATAAA----AATGTATTGATCTTTGATCTCGGTGGTGGTA 195896 ||| || ||| |||||| | || || | ||||| ||||||||||| || | Sbjct 878483 CGACCAG--CAAT--CGAAGACCGAGCGCAACGTCCTCATCTTCGATCTCGGTGGAGGAA 878428 Query 195897 CGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTG 195956 | || |||||||| || ||||| || || ||| | |||| || ||||| || || | Sbjct 878427 CTTTCGATGTCTCGCTCCTCAACATCAGCGGCGGTGTCTTCGCCGTCAAGGCCACCGCCG 878368 Query 195957 GTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 | || || || | |||||||| || ||||| Sbjct 878367 GCGACACCCACTTGGGTGGTGAGGACTTCGA 878337 >seq6 Length=2129081 Score = 158 bits (174), Expect = 2e-33 Identities = 156/202 (77%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || |||||||||| || || || ||||| || || || || || || |||||||| |||| Sbjct 299997 GTGGTATGCAAATTTTCGTCAAGACCCTCACGGGCAAGACGATTACGCTCGAGGTCGAGT 300056 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || ||||| ||||||||| | || || ||||||||||||||||| |||||||| || | Sbjct 300057 CTTCTGACACGATCGATAACGTGAAGGCGAAGATTCAAGATAAGGAGGGCATTCCCCCGG 300116 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || | || || || || || ||||| ||||| || || || || | || | Sbjct 300117 ACCAGCAGCGCTTGATCTTCGCGGGCAAGCAGCTCGAAGACGGCCGCACTCTTTCCGACT 300176 Query 172037 ACAACGTTCAAAAGGAGTCTAC 172058 | ||| |||| |||||||| || Sbjct 300177 ATAACATTCAGAAGGAGTCCAC 300198 Score = 156 bits (172), Expect = 6e-33 Identities = 158/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| ||||| ||||| || || |||||||||||||| ||||| || Sbjct 299435 ATGCAGATCTTCGTGAAGACCCTCACTGGGAAGACGATCACCCTCGAGGTGGAGTCTTCG 299494 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||||||| | || || |||||||| || ||||| || || || ||||| ||| Sbjct 299495 GACACCATCGATAACGTGAAGGCGAAGATTCAGGACAAGGAGGGAATCCCCCCCGACCAG 299554 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || | || || || || || ||||| || || || || ||||| | || || ||| Sbjct 299555 CAGCGTTTGATCTTCGCGGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTATAAC 299614 Query 172042 GTTCAAAAGGAGTCTACTCTACACCT 172067 | || |||||||| || || || || Sbjct 299615 ATCCAGAAGGAGTCGACCCTTCATCT 299640 >seq8 Length=1850677 Score = 113 bits (124), Expect = 6e-20 Identities = 101/127 (80%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 171965 GCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTA 172024 |||| |||||||| ||||| || || |||||||| || || ||||| ||||| || || | Sbjct 435957 GCATCCCACCCGACCAGCAGCGCCTGATTTTTGCCGGAAAGCAGCTCGAAGACGGTCGCA 435898 Query 172025 CCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGG 172084 ||||| ||||| ||| | |||||||||||||| || |||||||| || | || || | Sbjct 435897 CCCTCAGCGATTATAACATCCAAAAGGAGTCTACCCTCCACCTTGTCCTTCGTCTGCGCG 435838 Query 172085 GTGGTGC 172091 ||||||| Sbjct 435837 GTGGTGC 435831 >seq7 Length=1743449 Score = 107 bits (118), Expect = 3e-18 Identities = 181/257 (70%), Gaps = 5/257 (2%) Strand=Plus/Plus Query 195732 ACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACT 195791 |||||| || | || || |||||||| ||||| || | | || || ||||| | || Sbjct 1192291 ACTTCAACGACGCCCAGCGTCAGGCGACTAAGGATGCCGGCACCATCGCTGGTCTCA-CT 1192349 Query 195792 GTC-TTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAAC 195850 ||| || | || ||||| || || || || ||||| || || || || || |||||||| Sbjct 1192350 GTCCTTCGTATCATCAACGAGCCCACTGCCGCTGCGATCGCCTACGGCCTTGACAAGAAA 1192409 Query 195851 AAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCA 195910 | ||| | | | || | ||| |||||||||||||| || || |||||||| Sbjct 1192410 GGCGGCGAGTCTCAGATC--ATCG-TCTACGATCTCGGTGGTGGAACTTTCGATGTCTCC 1192466 Query 195911 CTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTA 195970 || ||| ||| || | || | ||||| ||| ||| || || ||||| || ||||| Sbjct 1192467 CTCCTCTCTATCGACGAGGGCGTCTTCGAGGTATTGGCCACGGCCGGTGACACCCATCTC 1192526 Query 195971 GGTGGTGAAGATTTCGA 195987 |||||||| || ||||| Sbjct 1192527 GGTGGTGAGGACTTCGA 1192543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657862284874080