Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457995.1_202015-11-
03] 14 sequences; 27,530,324 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq6 129 4e-25
seq1 114 8e-21
>seq6
Length=2129081
Score = 129 bits (142), Expect = 4e-25
Identities = 152/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831
||||||| ||||||||||||||| || || ||||| || ||| |||| | || || ||
Sbjct 300711 AGGTGAAGGGTGCTCTCCTTCTGGATATTGTAGTCAGACAGGGTGCGACCGTCCTCGAGC 300652
Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891
||||| || ||||| || || || |||||||| | || | ||| |||||||| | ||
Sbjct 300651 TGCTTGCCCGCGAAAATGAGGCGCTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAATC 300592
Query 34892 TTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951
|| ||||| | |||| || | |||||| || | || || ||||| |||
Sbjct 300591 TTCGCCTTGACATTGTCGATCGTGTCCGAAGACTCGACCTCCAGCGTGATTGTCTTACCC 300532
Query 34952 GTGAGGGTCTTTACAAAGATCTGCAT 34977
||||||||||| ||||||||||||||
Sbjct 300531 GTGAGGGTCTTGACAAAGATCTGCAT 300506
Score = 118 bits (130), Expect = 7e-22
Identities = 164/227 (72%), Gaps = 12/227 (5%)
Strand=Plus/Minus
Query 34760 AACCTCA---GGACC-AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCT 34815
||||||| | ||| || |||| ||| ||||||||| |||||||||||||| ||| |
Sbjct 299656 AACCTCACACGCACCGAGATGAAGGGTCGACTCCTTCTGGATGTTATAGTCCGAAAGGGT 299597
Query 34816 GCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCC 34875
||| | || || || ||||| || |||||||||| || |||||||| | || | ||
Sbjct 299596 GCGGCCGTCCTCGAGCTGCTTGCCCGCGAAGATCAAACGCTGCTGGTCGGGGGGGATTCC 299537
Query 34876 CTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACAT 34931
||||||||| | || || || || | ||||||| || | ||| || |
Sbjct 299536 CTCCTTGTCCTGAATCTTCGCCTTCAC----GTTATCGATGGTGTCCGAAGACTCCACCT 299481
Query 34932 CAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
| | ||| || ||||| || ||||||||||| || ||||||||||||
Sbjct 299480 CGAGGGTGATCGTCTTCCCAGTGAGGGTCTTCACGAAGATCTGCATG 299434
Score = 118 bits (130), Expect = 7e-22
Identities = 142/193 (74%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||| || || |||||||| || |||| |||| || |||||||| || |||||
Sbjct 300421 CTCCTTCTGGATATTGTAGTCCGAAAGAGTGCGTCCATCCTCGAGTTGCTTGCCAGCGAA 300362
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
|| || || |||||||| |||| | ||||||||||| | || ||| || |||
Sbjct 300361 AATGAGGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGAATCTTTGCCTTCACGTT 300302
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| |||| ||| | |||||| || | || || ||||| || || |||||||| ||
Sbjct 300301 GTCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTCTTGCCAGTCAGGGTCTTGAC 300242
Query 34966 AAAGATCTGCATG 34978
||||||||||||
Sbjct 300241 GAAGATCTGCATG 300229
Score = 116 bits (128), Expect = 2e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| || || | |||| ||||||||||||||||||||| || || |||| | ||
Sbjct 300213 AGGACGAGATGCAAGGTGGACTCCTTCTGAATGTTATAGTCGGAAAGAGTGCGGCCGTCT 300154
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || |||||||||| || |||||||| | || | |||||||| ||
Sbjct 300153 TCGAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCCGGGGGAATGCCCTCCTTATCT 300094
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || ||| | |||| ||| | |||||| || | || || |||
Sbjct 300093 TGAATCTTCGCCTTCACGTTATCGATCGTGTCAGAAGACTCGACCTCGAGCGTAATCGTC 300034
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| |||||||||||||| || || || |||||
Sbjct 300033 TTGCCCGTGAGGGTCTTGACGAAAATTTGCAT 300002
Score = 114 bits (126), Expect = 8e-21
Identities = 141/193 (73%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||||||||||||||| || ||| |||| | || || || ||||| || |||||
Sbjct 299911 CTCCTTCTGAATGTTATAGTCAGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAA 299852
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
||||| || |||||||| | || | ||||||||||| | || || ||||||
Sbjct 299851 GATCAAGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 299792
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| |||| ||| | ||| || || | || || |||||||| || | ||||| ||
Sbjct 299791 ATCGATCGTGTCAGATGACTCCACCTCGAGCGTGATCGTCTTTCCAGTCAACGTCTTCAC 299732
Query 34966 AAAGATCTGCATG 34978
||||||||||||
Sbjct 299731 GAAGATCTGCATG 299719
>seq1
Length=3320137
Score = 114 bits (126), Expect = 8e-21
Identities = 154/212 (73%), Gaps = 8/212 (4%)
Strand=Plus/Minus
Query 34770 CCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCA 34829
|||| || | ||||||||| ||||||||||| || ||||| || |||| | || ||||
Sbjct 2299117 CCAGATGGAGGGTGCTCTCTTTCTGAATGTTGTAATCCGAAAGTGTGCGACCGTCCTCCA 2299058
Query 34830 GTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTA 34889
|||||| || || || ||||| ||||||||||| |||| | || |||||||| | |
Sbjct 2299057 ATTGCTTGCCCGCAAAAATCAGGCGTTGCTGGTCCGGCGGGATGCCTTCCTTGTCTTGAA 2298998
Query 34890 TTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || || ||||||| || | ||| || || | || || |||
Sbjct 2298997 TCTTCGCCTTCAC--AT--TATCGATCGTGTCCGAAGACTCTACCTCCAACGTGATTGTC 2298942
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || ||||||||||| || |||||||||||
Sbjct 2298941 TTGCCTGTGAGGGTCTTGACGAAGATCTGCAT 2298910
Score = 104 bits (114), Expect = 2e-17
Identities = 154/216 (71%), Gaps = 8/216 (4%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||||| || ||||||||| ||||| ||||| || ||| | || ||||
Sbjct 2298893 AGGACAAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTCCGGCCATCC 2298834
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || || || || || || || || || | || | |||||||| ||
Sbjct 2298833 TCGAGCTGCTTGCCCGCAAAAATAAGGCGCTGTTGATCCGGTGGGATGCCCTCCTTATCC 2298774
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGC----CTCGACATCAACGGTTAT 34941
| || || |||||| || |||||||| | | |||||| || | ||| ||
Sbjct 2298773 TGGATCTTCGCTTTGAC--AT--TATCGATTGTGTCGGACGACTCGACCTCCAAGGTGAT 2298718
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||||| || || ||||| || ||||||||||||||
Sbjct 2298717 GGTCTTGCCAGTCAGGGTTTTCACAAAGATCTGCAT 2298682
Score = 100 bits (110), Expect = 2e-16
Identities = 150/211 (71%), Gaps = 8/211 (4%)
Strand=Plus/Minus
Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831
||||||| ||| ||||||||| || || || || || || ||||| |||| || ||
Sbjct 2298320 AGGTGAAGGGTAGACTCCTTCTGGATATTGTAATCGGAAAGCGTGCGCCCATCCTCAAGC 2298261
Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891
|| || || |||||||| || || |||||||| | || | ||||||||||| | ||
Sbjct 2298260 TGTTTACCAGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGAATC 2298201
Query 34892 TTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTT 34947
|| ||||| || | ||||| || | ||| || |||| || ||||||||
Sbjct 2298200 TTCGCCTTGAC--AT--TGTCGATAGTGTCCGAAGACTCCACTTCAAGAGTGATGGTCTT 2298145
Query 34948 TCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
||||| | ||||| || ||||||||||||
Sbjct 2298144 GCCCGTCAATGTCTTGACGAAGATCTGCATG 2298114
Score = 96.9 bits (106), Expect = 2e-15
Identities = 137/193 (71%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||| |||||||| || || || || || | ||| |||| |||| |||||||| |||||
Sbjct 2298588 CTCTTTCTGAATATTGTAATCGGAGAGAGTTCGCCCATCCTCCAACTGCTTTCCAGCGAA 2298529
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
||||| ||||||||||| | || | ||| |||||||| | || || || |||
Sbjct 2298528 GATCAACCGTTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAATCTTCGCCTTCACGTT 2298469
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| || | || | |||||| || | || || ||||| ||||| | ||||||||
Sbjct 2298468 GTCAATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTCTTCCCCGTCAAAGTCTTTAC 2298409
Query 34966 AAAGATCTGCATG 34978
|| |||||||||
Sbjct 2298408 GAAAATCTGCATG 2298396
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325692744428666
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |